EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS050-02537

Organism

Homo sapiens

Tissue/cell

Fetal_stomach

Coordinate

chr1:59350090-59353780

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CDX2

MA0465.1

chr1:59351155-59351166

GAGCCATAAAA

6.14

dbSUPER

Number of super-enhancer constituents: 21
ID	Coordinate	Tissue/cell

SE_00647	chr1:59347249-59354097	Adipose_Nuclei
SE_23453	chr1:59350219-59351480	Colon_Crypt_1
SE_24502	chr1:59350299-59351236	Colon_Crypt_2
SE_26435	chr1:59348168-59352921	Duodenum_Smooth_Muscle
SE_27652	chr1:59348371-59352916	Fetal_Intestine
SE_28563	chr1:59348281-59353338	Fetal_Intestine_Large
SE_31595	chr1:59348043-59353832	Gastric
SE_35530	chr1:59346509-59352407	HepG2
SE_38425	chr1:59346441-59351808	HUVEC
SE_40058	chr1:59346487-59352218	K562
SE_42871	chr1:59350221-59351520	Lung
SE_42871	chr1:59351537-59352831	Lung
SE_48526	chr1:59347442-59353242	Psoas_Muscle
SE_50404	chr1:59350167-59352054	Sigmoid_Colon
SE_52597	chr1:59348201-59352927	Small_Intestine
SE_54380	chr1:59350226-59351305	Spleen
SE_55736	chr1:59344477-59351222	u87
SE_55736	chr1:59351318-59353275	u87
SE_56970	chr1:59350186-59351267	VACO_400
SE_56970	chr1:59351509-59352135	VACO_400
SE_67605	chr1:59344477-59351222	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I058880

chr1

59346546

59353672

Enhancer Sequence

CTGGGATACC AAGTTCTTCT CATCTCCAGA TGTCTGGAAA ATGTCTCTAA ATAAAACATC 60
TTTTTGCTTA TATTCTAAGG CAGCTATCTG CCTCTATCTA AATACTCTTT TAGTGAAGAA 120
AGGGGCAGAG CAAGGAGAGT CAATCTACTT GTAGAAGTTT CTCATTCTGA ACAGTGTACT 180
TTACAGATTC CAAAGTGTTT CTCCCTCCAT TACCTCTTTA CCCCTTACTA GAGCAAGCCC 240
AGATGTGAGA ACTGAGGCTC CGAGAGGTTC AGTGACTTAC CTGGAGCCAT TAACATCTGA 300
GTGAGTGAGC CAGGAATTGA ACCCAAGGCT TTCAGACTCT GGACACCTAC CTTTACAGGA 360
GGCATTGGCC AGCCTCTTCC CCTCACACAC ACATCCTCTC ACCCTGGGGT TCTGCTTAGG 420
AAGCATAAGA AAGGCAGTGA GCCAGGCTCC AACCTTGAAG CCAAATCCTT GCAGTAATAG 480
AGAGGACTAA GGGCTAGAGA GAGGAGCCAG GAACCGTGGA TCTCTGCCGT GAATCCGAGC 540
CCTTAGAGCT GGAGACCTCA CTTGGACCAG TCTTCTGTTT TCAGTAGCTG TAGTGAGTGA 600
GATCAAGAAC TAATGTCAAG AGCCCAGAGC CCCTACCAGC ATTGCATGAT AGGATTTTCT 660
GTGATAATGC TGTATCTGTG TTGTACAATA CAGTAGCCAC TAGCCACATG TGCTATTGAG 720
CACTTGGAAT ATGCTCAGTC ATAGGACTGA GCCATCAACA TCCCTGTTTT ATAGCTGAGG 780
AAACTGACGC TCAGTCAGGG AGGTTGTTGA GGTTGCAGTT AGCCAGCCAT GTCACTGAGA 840
CTTGAAGCTA TCCTGTCTGG CCCCCAAGCC ATGCCCTTCA CCACCACAGA AGCCTCTTGT 900
TCCACTCCCC AAGGAGGGTC TTTGCACCCT TCTGAACCAG ACAGGTGATT GGGTCATGTC 960
TGCCTGTGCG AAGGGGTCTC CCTTCCTGCT TGGCTCCACC TGGCTCCAAC TCTAGAAAGC 1020
ACCTGTGTTG TTTTACTGAT AACAGTGTTT GCCCTTCCAA AGCCAGAGCC ATAAAAGGCA 1080
GCTTTCAAAG TCACTGCCGC AGAAATGTCA ACATGAGGGG GAGGCCAGTC ATGGTTTCTG 1140
AGGCCCAATG TCACCTCCAG GCTGCTGCAA AGGCTGCTAC AAAGACCTTC GGGTCCTGGA 1200
ATCTGGACTT GCTTCTACCA CAAACTTGCT GCGTTTCCTT GAACATATTT CTTACTTCCT 1260
CTGGGCCTTG TTTTTATCAT CGGTGTAAGG AGAGGGTTGA ATTTAAAGAT CTTAAAGGGC 1320
TCTTCTATCT CTAAAATGTT TAGTGTCCTC TGCACGGGAT CCTGGGGTCA ACATCTAAAT 1380
CTCCTATTTA ATGACTGTGA AATACCTTAT GTAGCAGCCT TCAAAACAAA ATCACCCCCA 1440
AACCTTAACC TGGAGTTTTT TTAAAACCTC CAACAATGTC ACCATTGAAG CAGTAAAGGT 1500
ATTCATTAAT ATCTTGTAAA AAGTGATTTT GTGATTTTCT TAATGTATGA AAAAATGTCC 1560
CCCGCCCTTG ACACTGGGCC CAGAGCCCCA GAATATAAAA CCACAGTCAG ACCACTAGGA 1620
TTCTACAGAG CTCAGGTGTT TGGACAAATT GCCTGCACTT GAGAATACAG GGCAATTTTC 1680
TCGACTTTTA AAATGTTTTC TCCCTTCCCC CCACTTTTCT GGGGTTTTCA CCCCTGCTTG 1740
TAACTCAAAC CACAAATAAA GCTCTAAGCC TCTGGCTGTG AGGAACAGCG CAGTGGCTGC 1800
CAAGAACAGC ATGGTTCACG TGGGCCCTTT TTCTGCCGCT CTGGAAACCA GCTCTCCAGA 1860
GGACAGCACA ACATTCGTTT TTCTCTTTCT TTACTAATCA CAAAAATATT GCTTTTCAGA 1920
TGGGCTGGGG AAGGGGCAGA TTGGTGTTGA TTGGTGGTGG ACAGGGTCAG ATTGGCAGCC 1980
TTAGGTGCAG CAGAAGCCAG GTATGGCAGC CACAAAGATT TATATATCCC TCCCAGATGA 2040
TGGCTCTGAT ACTCCCATTT GAGGCTTTTA CCCTGGAACA TGGCACATAT TGGTGTTCAA 2100
TACCTGTTTG TGGTTGAATG AATACACTTT TACAAATATT CTTTCTTAAC AGAGGGATAA 2160
GCATTCCTGT TTTTCTGCTG AAACTGAGGA AACTGAGGCT CTGAGAGAGT AGCCGACTCA 2220
GTCAGGGTCA TACACACAGT TACCTGGTAG GGCTGTTGTG TGACCCCAGG CTGGCCCCAG 2280
ATTGGGCTCT TCCACTCACG CTCTTTCTGC GTCTGCCTCT CAGCCATACA AGCCAAAGAA 2340
ACACTGTGTT CCCAGCCCAC GAATGAAGCT GAGGCATGAT GGACAAGGCT TATGGAACTA 2400
GACTTTTCTT CTCCAAGTGC TCTCTCCCAC AACTTCCAAA ATTATCCCCA TGGGGATGAT 2460
GCTTACAACA GAAATGCCAG CTCCACCCTC TTTCCAGCTG CCTGCTGGAC ATCACTGCCT 2520
GGATTTATGC TCAGTTCTAG ATACAATGCT TGGCCTAGAG TGGGTGCTCA CTGTTGAATA 2580
AATAGTCAAT GATGTCCTAC AGATAATATC TGAATCTAAG TTCACCGTAT CCACTGCTGA 2640
GTCCCCAGTG CCTAGACAAG GCTTGGGGAA CAATTGTTCA ATGAATAAAT GGAAGAATGC 2700
ATTTTCCCTC CCTCCAACAT AGTTTATTTT TTGGATTGCC TACTTCTGCT GAGATCCTCA 2760
TCCCTCTACA GTTTCTCAAG CCAAAAGCCC AGGACTTCCC CAGGACACCC CTTCTCTCAT 2820
GTGACTCTCA GCAAACTGGT CACCACATTC TTTCAATTCA CCCTCTGACC TGTCTTTCAT 2880
GCCAATCTCC TCCTCTCCAA ATCTGAACAC ATGAACTTCT TTACTTTATT GTGCAAGATT 2940
GTATTGGTTA CAAGGAGCAA AAACCCAACT TGAACTTGCA TAAGCCAAAA AGGAGATTTT 3000
AAATGAGAAG AATATAGGGA AAATCAAAGA ACTGATGGAG AAACCAAACT ACCAAGCCCC 3060
AGGAATGGCA GAGTTGGCTG GAACGGGGTG CTCTGATTCT GACAGCTCTC TTTCTCTTAC 3120
ACCTCCATCT TCTGAGTTCA TTGATGTACT GGCCTCATTC TCTCTCAGCA GTTTCCTCAG 3180
TATCACAGGG ATGTGGATGC TACACACTCC TATCTATACA GTTTTGGGGT CAGAGTAGAA 3240
AAAACCTCTT TCCCATGTGC TGCAATGTCA TAATTCCTAG AGAACTCCAA TTTACCTAGT 3300
GTGGCATATG GGCCTGCCCC TGGACCAGCC ACTGGGGTTG GCAGCAAAGA ACACCTCTGT 3360
GGGAGTTAGA AGAGGGCACT ATCTTCTGAG TGTCTGCACC TCCACAGGTG CAAGCTTGCC 3420
CTGCAGAGCA CAGGCTGGAT TCCAGTCCCC ACTTATTATC CCTGCCAGAC AAGCTTCTAC 3480
AGGGCATAAC CTGCACAACT GTACATGGCG GACCTGGCTG GCAGTGGATG TGGGGCTGGG 3540
CACTCCCAGT TCGAATCAGA TGTCTACACC TGGCCAATTA CTACTGTTAG AAAGGCAGGG 3600
TCATGCAAAT GATCTCACTT TCCATGTGGA CACGTGGTCA GAGTGGAGGG AGGTTTGGAA 3660
AAAGAACATT TCTCTAAGAA AGGAAGGTAG 3690