EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS050-02377

Organism

Homo sapiens

Tissue/cell

Fetal_stomach

Coordinate

chr1:54836590-54838080

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata1

MA0035.3

chr1:54837657-54837668

ACAGATAAGGA

6.14

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_04901	chr1:54835827-54837389	Brain_Cingulate_Gyrus
SE_07802	chr1:54836313-54837725	Brain_Inferior_Temporal_Lobe
SE_24449	chr1:54836420-54838982	Colon_Crypt_2
SE_31383	chr1:54835542-54839176	Gastric
SE_41605	chr1:54835339-54836818	LNCaP
SE_41605	chr1:54836881-54839038	LNCaP
SE_50141	chr1:54836364-54839054	Sigmoid_Colon
SE_52383	chr1:54836643-54838577	Small_Intestine
SE_59737	chr1:54819743-54855281	Ly4

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I054370	chr1	54836588	54837121
GH01I054371	chr1	54837413	54840674

Enhancer Sequence

TGTTCTTCCT GATGTTCTTA GCACTGTGCC GTAAGCACAC ATGGTCCTGA GACCCAAATG 60
CTGTAATACC CCAGGGCTCA GTGATTGAAA AGACAGGGCC AACCCCCTCT CCAGTGGCGG 120
CTGGATGGGA GAGGAGCAAC AAGACTGCTG CCAGAAGACC ACCCAAGGGG GGGTATGCTG 180
AAGGGCCACG AGAAAGGTCT CCAAACACCC CAAAGCTACA GACACTTGTT CCACTGCATT 240
ATTTTCATAG CCATATCAGG TCGCCCTGCA GGCAAACACT ATTCTCAGAT AGGAGCTGCA 300
TGTTCTCACA AGACTAAGTT GCTCAGAGTT AAGATTAGGT TTAGAGCGCA TTAACTCCAG 360
CACCGAGGAA CACTCCATTG TGGACTGAGT AGACACTACC ATGAGCTCAA GCGCCCAAGT 420
GGAAGAAAGC GTGTGTGGAT GCCATGTGTG CATGAACATG TCACACCTTA CATGATGACT 480
TGCTTCAGAA GGCTGGCTCT GGGGAAGGCT TGGGCGATTT TAAGCCTTGT TTGCCAACAC 540
ATAGGGAGTG CCTGCTGGGG CCTTCCTCTA CTGTGACACG GGCACAGGAA TGGGAGAGAG 600
ACACACCCAG TTTGGTGTTT CAGTGTGTCT GCAATGATGG TGCCTCTGGA TGCACTCTCC 660
ACCCCCAAGC TACCGCCTCT TCTAAAGTGA GGCTAAAATC ACCCATAGGA CTGATGAGAG 720
GACCATCAGT TAACAATCAT CAATATCGAG AGAGAAGACA CAATAATAAA AATGACAACT 780
GCGTACAGGG ACTGTGCATG TGCCGGTGCT GCACTGGGCA CCGTGCCCAC GTTTTATCTA 840
ATCCTGCCAA AGCTGACAGG CTCCTGGCCT CAAAAACGAA GACAGTCGGG CAGGGGTGGG 900
GGAGTGGCTA CCTTAAGATT AAACACCTTT CTACCCTGCA ACCACCACCT GGTACAGGAA 960
CCGAGGGAAG GGCCTCCCAC AACATGAGGC ACTCTCTGAG CACATCTCAT ACAGCCAACT 1020
CCACCCGAGA ACCTCATCCT TTCACGGACA TGGGTTATAC TCACTTTACA GATAAGGAAA 1080
CTGAGTTGGA AGGGACTCAC CAACTCTCCC AAACCACTAG TTAATGAGTA TCTCCAACAA 1140
CCAGACCTGG GTTCCTGTCA GGCAAGGCAG GCTAGGCATG TGCCTGGTCT CCCGAGCCTG 1200
ACTCTAAAGG TTTCCAGACT GAGTCCCACA TGCCGTGTAA GCCCTGACAA ATTACTTCCC 1260
TTCTCTGTGG CTCAGTTCTC CAACTGCAAA ATGGGGTAAT ACCTGCCTTG CAGGGTTGGT 1320
CTGGAGGATT AAACTACCTC ATGTTGAAAG CACTGAGAAC AGGGGCTGGC ACAGACTGAG 1380
AGCCCAATAA ATGTCAGGCA CTATCAGTGT TCACTGGCCA TAATCCTCCA AGACAAAGAT 1440
CTGCACCTGC CTGGAATGCC CCTTCCCCTC CACTTTCTTT CTCACTCCTT 1490