| Tag | Content |
|---|
EnhancerAtlas ID | HS050-00956 |
Organism | Homo sapiens |
Tissue/cell | Fetal_stomach |
Coordinate | chr1:19755880-19757450 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Sox3 | MA0514.1 | chr1:19756464-19756474 | CCTTTGTTTT | + | 6.02 |
|
| | Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
| SE_00361 | chr1:19746887-19757387 | Adipose_Nuclei | | SE_01631 | chr1:19755843-19757681 | Aorta | | SE_02919 | chr1:19755911-19756933 | Bladder | | SE_04046 | chr1:19756053-19757455 | Brain_Anterior_Caudate | | SE_05833 | chr1:19750586-19757279 | Brain_Hippocampus_Middle | | SE_09593 | chr1:19755451-19756990 | CD14 | | SE_18410 | chr1:19754667-19757430 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19269 | chr1:19755104-19757108 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_23237 | chr1:19755928-19757811 | Colon_Crypt_1 | | SE_25786 | chr1:19750802-19758037 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19754835-19758103 | Esophagus | | SE_28668 | chr1:19755603-19757198 | Fetal_Intestine_Large | | SE_29645 | chr1:19755678-19757560 | Fetal_Muscle | | SE_31164 | chr1:19754803-19757992 | Fetal_Thymus | | SE_31447 | chr1:19755938-19757724 | Gastric | | SE_41031 | chr1:19755895-19757535 | Left_Ventricle | | SE_42185 | chr1:19755689-19757735 | Lung | | SE_45110 | chr1:19755943-19756940 | NHLF | | SE_45720 | chr1:19751083-19757454 | Osteoblasts | | SE_46635 | chr1:19755894-19756886 | Ovary | | SE_47234 | chr1:19755677-19758314 | Panc1 | | SE_48688 | chr1:19755923-19757600 | Right_Atrium | | SE_50058 | chr1:19755847-19757828 | Sigmoid_Colon | | SE_51211 | chr1:19755657-19757588 | Skeletal_Muscle | | SE_52345 | chr1:19754876-19757871 | Small_Intestine | | SE_54550 | chr1:19750611-19758089 | Stomach_Smooth_Muscle | | SE_56083 | chr1:19755047-19757873 | u87 | | SE_65446 | chr1:19755872-19757833 | Pancreatic_islets | | SE_67779 | chr1:19755047-19757873 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019422 | chr1 | 19749273 | 19757876 |
|
Enhancer Sequence | AAGATTACTT CTTCCTTTTC TTGAAGAAGT TCAAGACTCT AAAGGCAGAG ATACGATATA 60
CTAATAATTC CTACTTTCCC ATACAACCTG CATAAGCAAG TCACCACCTC ATCCCTTGGA 120
ACCTCAGTCT TCTTTAAAAC CTGGGTCCGA CGGTACTGTC TACCTCACGG GCCACTGGGA 180
ATGAGGTACC ACGTCTGGGC CATAAGGGCA CCGCCCACAG AGCATCCTCC ATAAAGGGTA 240
GGAACTCTCC CAGAGAGTAA AGCACATGGC TTATCTGCCA GGACTTTTAC ATAACATTTT 300
TTAGGTGCTA GAGGGTCCTT TCTGCCTGGA TTTTTCCCTC ACTTGACACA GGTTTTCCAT 360
TCAGGCTGCC AGGAGTCTCT AGAAAGGTAG GCGGAGTGTT ATGTCAGTTT CCAAGTCATT 420
AAGCACCCAC AAAGGAGGGC AGGCTTGCAC AGCACTCACT CCACACAACC GCCCCTGCCC 480
TGAGTACGAC GGAGCACATG GCTTCCCTAA AGCCACAAGG AGAAGAGAGG CAGGGACAGT 540
GAGAGCTGAA GGAATTCCAC ATGTGTCCAT GGAAGATCAC CTTCCCTTTG TTTTCCTGCA 600
CTCTAGTAAC TCCCTCATGC AGCTTGCTTT CTGAAGCCCT CTGCTCCATT TCCCCAGCCC 660
AGGACAGCAT CAAGAAATAT TTCCACCATC TCATCTATTT GAACCTTCTC CCTATTTACT 720
GGTGCTCCCA ACCCCATCTG AGGCCATCGA AACCAGACAA CTGTGGCAGC ACTAGCAGAG 780
TCCCCAAACT ACCCTGACAC CCTCCCTGGC AAGGAAAATT TCCACGCGCC TCTCCCTGGC 840
ATATTTATTC CAGAGGAAAA CTTAGCAACC TACACACTAC ACACAGGCTC TGTGTCAAAC 900
TCTACAACAG CCATCAGTTG ATCTTTCCCT TACACATCCC TCCAGGAAGT GAAATATCCG 960
AAATGAGTCA TACTCAGGAG TCGGAGCTAT ACTTCCACTG TAGTTTTTTT GGATAACCAA 1020
TTCACTGTTT ACACTCCAAA ACCTCTAATT GCTGAACACA GAACAGTTCC TTTGCAGAGA 1080
TCAAAGCTTA CCTGGTGAAC CTGGCGAAAT GACAAAAATT CTCCAAAAGG AGTTAGCCAT 1140
CCAGAGTGCC AGAGGAGGGT GGCTGTACAA GCACATTTTA ATTGGCAAAG CAGAGTCGCT 1200
GCCCAGCAAG GAAGAGTATG CAGGGGTTTA TTCTGCTGCT CTTCTATTTC CCCTTTAAGG 1260
CATATATCTC TTACCCCTGC ACCCACCAAC TTTAGTCACT CCTAGCACAC AGCTGGCGGC 1320
CGCCCACCCG CACCCGCACC TGCACCCGCA CCTCAGAGAG CTTGCTGATC CCTGAGCCGT 1380
GCACTGAAGC TTCCAAGCAG CTCTACCTAA AGGCAAGCAC TGCCTGCTTT TTACAACATA 1440
TACAATGGGC TAACCTGATG CACAGAAAAA CCCTGGGTCA CATGACAACC AACAAACTCA 1500
TTGCTCAGGA TGGCTCTCCG CCACGTTTCT CAGGCACTGT GCTTGGCTCT GCTGGCCAAC 1560
TGAGTGAGCT 1570
|
