| Tag | Content |
|---|
EnhancerAtlas ID | HS049-06353 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr5:141235130-141236400 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RREB1 | MA0073.1 | chr5:141235316-141235336 | CCCTAAACCAGCCACCACCC | + | 6.25 | | TFAP2A | MA0003.3 | chr5:141235958-141235969 | TGCCTGAGGCA | - | 6.02 |
|
| | Number of super-enhancer constituents: 13 | ID | Coordinate | Tissue/cell |
| SE_03972 | chr5:141234755-141235725 | Brain_Anterior_Caudate | | SE_03972 | chr5:141235999-141236947 | Brain_Anterior_Caudate | | SE_05011 | chr5:141234847-141236155 | Brain_Cingulate_Gyrus | | SE_05908 | chr5:141234537-141238290 | Brain_Hippocampus_Middle | | SE_07007 | chr5:141235260-141236091 | Brain_Hippocampus_Middle_150 | | SE_07803 | chr5:141234407-141238555 | Brain_Inferior_Temporal_Lobe | | SE_23100 | chr5:141235073-141235733 | Colon_Crypt_1 | | SE_23819 | chr5:141235174-141235772 | Colon_Crypt_2 | | SE_24795 | chr5:141235144-141235992 | Colon_Crypt_3 | | SE_31440 | chr5:141234954-141236423 | Gastric | | SE_42262 | chr5:141234639-141236481 | Lung | | SE_65370 | chr5:141234657-141236690 | Pancreatic_islets | | SE_68674 | chr5:141234997-141238793 | H9 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I141855 | chr5 | 141234640 | 141236947 |
|
Enhancer Sequence | CATTGCTTCC TTCAGAACCC CCTCAAGCTT CACATGCTCC CGGTGGTCCT GAACCCACCC 60
TCCTCCTGCA AGACCTTGCT TTAAAGCCAG GGGGAAGGGA CGAGCTTCTG TGTGGGGTAT 120
TCACATAGAG GCACACACTC ACATCCACAA GCACGCTCAT GCAGCCCCTC CCCACCTCAC 180
TCTGGCCCCT AAACCAGCCA CCACCCCTGG CCTTGCCCCA GCTCCCTGCC CAGAACACCC 240
ACGGGAACAG GAGTTGGCTG CCTGACATCA GCAGTAGCCG GTGTAGTTGC TGGGCAGCGG 300
GGGTCTCCAT GGGAACGGCT GGGCCATGAG TACTTCCTGT CACAGCTGTC CCTGTCCTGC 360
CCTTGCTCAG GGACAGCACC AGGCAGTGAC CCCCCCCCAC CCCCAAGGGA CATGGCTAAG 420
CAACACTGCC TGGGACAGGG GCTCCCCTGG CACCACCCAC TATGGCTTGG CCTCCTGCCA 480
GTGCCAGGTG AGGAGGGGAC AGCTCTGTTG TTAACCCTCA AAGTGCCAAG GCTCTACAGC 540
TCAGAGCAGA GTTGGGGGAC GCAACATGGC TCAGAGCAGA GCATGGGCAC TGGGTGGGTG 600
AGGCTGGGTG CTGGGCAGAG TCCCACAGAC CCCAGACCCC AGAGCAGTTC CCACATACCT 660
GGCACTCTGC CTCAGGGCCT GCTCCGGCCA GCCGGCTCTG CGCGGGCACA AAAAGGATGA 720
GACGGGCATG AGATCGCGCA TGGAGGGGCG GGGTGGGGGT GGAGGGCACT CTGAGACCTA 780
GGGCCTGGGA GGTTAGACAA GGGCCCGGGA GGTTAGACAA GGGCCCTGTG CCTGAGGCAG 840
GGGAGTGAAA CCTCCCATCT TTTGTGGAGC GAGGAGGCTT TGAGTTGAGG GAGTGGGTGG 900
GACCCGAGGA CAACTCCAAC TTAGAGAGTC TTTCCATCTC AGGGGTTAGC TCGTTCACTC 960
TCCCCCTCCA CAGGCTGCCA TGGACGACTT CACACATGCA CACGCACTGC ACACACACTG 1020
ACGGCACACC TCACCATCCA TTCCCATGCC GACCTCTGCG CTGGCTCACA CCTCCTTTTT 1080
GCCATCACCC TCCAAATCCC TCCCAGACAG GCCTTTCTCT TCACCAGACC TCCTACCGCG 1140
CTCTTCCTCA AAGAGGTGCC AAACCTTCTC CCACTCCTCA CCCCAGCATA TCGTCACTCC 1200
ATTCTCTGAG CCCCCTGTAG CATCCAGGGC CCAATCTCTA TTCTCAAGGC CTTCCCAACC 1260
TTAGAGGACC 1270
|
