| Tag | Content |
|---|
EnhancerAtlas ID | HS049-04935 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr20:24985630-24986860 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RARA | MA0729.1 | chr20:24985766-24985784 | GAAGTCATAATGTCAAGT | + | 6.15 | | RUNX1 | MA0002.2 | chr20:24986309-24986320 | AAACCACAGAA | - | 6.32 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_05737 | chr20:24985926-24987199 | Brain_Cingulate_Gyrus | | SE_27084 | chr20:24985942-24986842 | Esophagus | | SE_31460 | chr20:24985875-24987605 | Gastric | | SE_40636 | chr20:24985591-24993480 | Left_Ventricle | | SE_41643 | chr20:24985888-24986805 | LNCaP | | SE_42209 | chr20:24986235-24987772 | Lung |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 3 | Chromosome | Start | End |
| chr20 | 24985889 | 24986125 | | chr20 | 24985786 | 24985842 | | chr20 | 24985634 | 24985684 |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH20I025006 | chr20 | 24985901 | 24986090 | | GH20I025005 | chr20 | 24986236 | 24987772 |
|
Enhancer Sequence | TGCTTGACCT GGGGAGGTGG AGGTTGCAGT GAGCTGAGAT GGTGCCACTA CACTCCAAAC 60
TGGGTGACAG AGCAAGACTC CATCTCAAAA AAAAAAAAAA ATTAGAAATA TTTTTCCAAA 120
CAATCCATGA TGCAAAGAAG TCATAATGTC AAGTAGAAAA GCCAGAACTG TACCCCCAAA 180
AGAGCAGGTA CCTCTGCAGA CCTGGCCCTG GCACAGGATA TCTGGGAGCA GGTTGGATAG 240
CCAGTCTGTT TGCTCTGCAA AAATTTCTTT GTGGAATAGC AGAGGGGTGT TGCAGCGATG 300
CCAAATAAAC ATAGAACAGG ATCCTAGAAG CTGGAGAAGG AGGAACCCTT GGCCAGAAGC 360
CCTGGAGCAG CTCTGTTTGT TAATTATTTC TGTAGTAACC AAGGGAACAT TGGTGAGCAC 420
CCCACAGAGT AACCACAGGT CAGCATCAAA GTAAGCAAGT AGCTGGCTGG CAGTATTTCA 480
CAGCATCTTT GCTTTTCTTC CCAAATCTGC AGTTTGAGAG AGGCGGCTTG CCCTGGGAAC 540
TCTGCTGGTA GGGCATCATG CAGCATGGTC CAGAATCCCT TTCTTTTTTG TCACAACCTC 600
TGTACAATAT GAAGTAGGAA AGTTGTATTC GTTTGTATTC ATTTGCTGCT GTAACTAAAT 660
ATCATAGGCT GGGTGGCTTA AACCACAGAA ATCTGTTTCT ATGGAGGCCA GGAAGTATAA 720
GATCGAGGGG CTGGCAGATG GGTGTCAGGA GCAGACCCAG ACTGCTGAGA TTCTGCCTCT 780
GTGGCACTGA TTCAGTGTGT CCTGATGAAG GACCAGCCCA CCCTAGCGGA GGGATGACCC 840
AGGGACCAGG CCATGCTCCT CATGCACGCT ACTCAGAGCC AGGTTGTCCC TCGCTCTTGC 900
CTGTGCTCTA GCCCAGTGCC GCCTGCGGCC TCCAAGTGAT GGTGGTAGTG CGCCTATCTG 960
ACCTGCTGTG CATGGCCTCT GGGCACTTGA AATGCAGCAA CTGCAGACTG GGAACCAAAT 1020
TTCTATTCTG TTTAAGTTAC AGTTAAGTGG CCACGTGTGG CTGATGCATC AGCGCAGTCA 1080
GCCATCCTTG GTAAGGCAGG TGAGCTCACC AAGGAGCAGT CAGGGCTGTG AGTGTGAACC 1140
CCCCAGGAGA AAAGGCCCCT TCCAATTTTG TCTGTAGGAT TATATTCAGG AAAAAAAAAG 1200
AGTAGCATTA CTGGACCCAA AAAAATCACC 1230
|
