| Tag | Content |
|---|
EnhancerAtlas ID | HS049-04888 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr20:4065800-4066690 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr20:4066064-4066083 | AGCTGCCCCCTGGTGGTCA | - | 7.51 | | RARA(var.2) | MA0730.1 | chr20:4065810-4065827 | GGGTCACACCAAGGTCA | + | 7.26 |
|
| | Number of super-enhancer constituents: 6 | ID | Coordinate | Tissue/cell |
| SE_02096 | chr20:4062805-4066636 | Aorta | | SE_44675 | chr20:4065364-4066652 | NHDF-Ad | | SE_45422 | chr20:4065808-4066698 | NHLF | | SE_46211 | chr20:4061994-4066607 | Osteoblasts | | SE_50015 | chr20:4062987-4066550 | RPMI-8402 | | SE_56592 | chr20:4062109-4066596 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I004081 | chr20 | 4062025 | 4066999 |
|
Enhancer Sequence | CCAGGGTTAG GGGTCACACC AAGGTCAGGT TTTTAAAGTA TAGGATCCCA TTTTTGGTAC 60
TGAAACGTGG TTGGGGTATT TAGGGGTCTG CCTATTGGGA CAAAGGTTTC TTGGAGGACA 120
TCGCACACCT CTCAACCTGA GGACTCCTTA TGGGCTCAGG GGAGCAGCTA CTGGCTGAGA 180
TTTTTAAAGC AGGGTCTCAG TCAGTGAAAG CCTGGCTTGC TTTCCCTGAA GAGAGCTATG 240
CGCGTGCCTG GCCATGGGGC TCACAGCTGC CCCCTGGTGG TCAGCCACAG CCCCCTGCCA 300
ACCCTTGGGC GTGGTATTTT TCCAGCCTTA AGTCAGGCAG CAACGGCACA TCCTAACGCA 360
GGGTCCGTCT GGTTCCCGGG CCCCAGGTGG CGAGGGAACA GGAATGAGGG CTCTCCGGCA 420
CTCTCCGCTT TGCCCTTGGC CTCCTTTTTT CATCAGGGAA GACTCAGGGG AGGGCCTGCG 480
CTGTGCCTCT CTTCAGCATC TGTGAAGATT CTGCCAGCTC CCCAGCCCCG TGCTCTCCGA 540
GGGCATTTTT GTGCACGCAG GGCAGATTCC GGATTCCAAG AACATCAGTC ATGGAATGAC 600
CTCTCTCCGG CCCCTTGGTG TGACCTCACT GTCTTGCCTC CTCCACCTGC ACGTTCTTTG 660
CCAGCCTGTA GGTCCTATCG TGGGGACTCC TCCCTGACCT CTGCCAATTT GAAGTGGGAA 720
CTCAGATGAG TGCCTCTGAC TTTTTTTTTT TTTTTTTTTG AGACGGAGTC TCGCTCTGTC 780
GCCCAGGCTG GAGTGCAGTG GCGCGATCTC GGCTCACTGC AAGCTCCGCC TCCTGGGTTC 840
ACGCCATTCT CCTGCCTCAG TCTCCCGAGT AGCTGGGACT ACAGGCGCCC 890
|
