Tag | Content |
---|
EnhancerAtlas ID | HS049-04470 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr2:54795730-54801330 |
SNPs | Number: 3 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr2:54796552-54796573 | GAAAGAAAAGTGAAAGAATAG | - | 6.69 | Nkx2-5(var.2) | MA0503.1 | chr2:54796996-54797007 | CTTGAGTGCCT | - | 6.14 | TCF3 | MA0522.2 | chr2:54796258-54796268 | AACACCTGCT | + | 6.02 |
|
| Number of super-enhancer constituents: 81 | ID | Coordinate | Tissue/cell |
SE_00006 | chr2:54795695-54808079 | Adipose_Nuclei | SE_00896 | chr2:54796053-54796629 | Adrenal_Gland | SE_00896 | chr2:54796769-54797896 | Adrenal_Gland | SE_00896 | chr2:54798017-54798845 | Adrenal_Gland | SE_00896 | chr2:54799791-54802361 | Adrenal_Gland | SE_02562 | chr2:54796678-54802057 | Astrocytes | SE_04102 | chr2:54796918-54798099 | Brain_Anterior_Caudate | SE_04102 | chr2:54799690-54802108 | Brain_Anterior_Caudate | SE_07789 | chr2:54796529-54798132 | Brain_Inferior_Temporal_Lobe | SE_10400 | chr2:54794677-54803227 | CD19_Primary | SE_11005 | chr2:54790737-54825699 | CD20 | SE_11903 | chr2:54795467-54804954 | CD3 | SE_12885 | chr2:54795717-54796939 | CD34_Primary_RO01480 | SE_12885 | chr2:54798660-54800004 | CD34_Primary_RO01480 | SE_12885 | chr2:54800577-54801934 | CD34_Primary_RO01480 | SE_13387 | chr2:54797492-54801918 | CD34_Primary_RO01536 | SE_14098 | chr2:54797046-54797912 | CD34_Primary_RO01549 | SE_14098 | chr2:54798186-54800123 | CD34_Primary_RO01549 | SE_14488 | chr2:54795303-54804872 | CD4_Memory_Primary_7pool | SE_15498 | chr2:54795663-54803273 | CD4_Memory_Primary_8pool | SE_15859 | chr2:54795710-54797849 | CD4_Naive_Primary_7pool | SE_15859 | chr2:54798421-54804026 | CD4_Naive_Primary_7pool | SE_16386 | chr2:54795629-54803366 | CD4_Naive_Primary_8pool | SE_16936 | chr2:54795657-54803270 | CD4p_CD225int_CD127p_Tmem | SE_17333 | chr2:54793892-54821363 | CD4p_CD25-_CD45RAp_Naive | SE_17873 | chr2:54795021-54811216 | CD4p_CD25-_CD45ROp_Memory | SE_18341 | chr2:54795035-54821330 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19520 | chr2:54795631-54804015 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20164 | chr2:54795681-54809753 | CD56 | SE_20822 | chr2:54795629-54803439 | CD8_Memory_7pool | SE_21502 | chr2:54795741-54803316 | CD8_Naive_7pool | SE_21966 | chr2:54795626-54804551 | CD8_Naive_8pool | SE_22380 | chr2:54795196-54811289 | CD8_primiary | SE_23128 | chr2:54796037-54797962 | Colon_Crypt_1 | SE_23128 | chr2:54797995-54802474 | Colon_Crypt_1 | SE_23914 | chr2:54796781-54797605 | Colon_Crypt_2 | SE_23914 | chr2:54799575-54801320 | Colon_Crypt_2 | SE_25070 | chr2:54795905-54797954 | Colon_Crypt_3 | SE_25070 | chr2:54797970-54802593 | Colon_Crypt_3 | SE_25877 | chr2:54795570-54803197 | Duodenum_Smooth_Muscle | SE_27348 | chr2:54796675-54797759 | Esophagus | SE_27348 | chr2:54797982-54798877 | Esophagus | SE_27348 | chr2:54798913-54803836 | Esophagus | SE_27627 | chr2:54794756-54809409 | Fetal_Intestine | SE_28537 | chr2:54794775-54810703 | Fetal_Intestine_Large | SE_29772 | chr2:54796534-54797841 | Fetal_Muscle | SE_29772 | chr2:54797867-54801835 | Fetal_Muscle | SE_31160 | chr2:54795567-54803312 | Fetal_Thymus | SE_31545 | chr2:54796047-54796613 | Gastric | SE_31545 | chr2:54796712-54798915 | Gastric | SE_31545 | chr2:54798932-54799520 | Gastric | SE_31545 | chr2:54799542-54802418 | Gastric | SE_32493 | chr2:54794685-54809919 | GM12878 | SE_35301 | chr2:54797810-54803653 | HeLa | SE_35875 | chr2:54796741-54804603 | HMEC | SE_38000 | chr2:54795734-54802579 | HUVEC | SE_39396 | chr2:54795484-54802646 | Jurkat | SE_40773 | chr2:54795956-54796644 | Left_Ventricle | SE_40773 | chr2:54796706-54802488 | Left_Ventricle | SE_42137 | chr2:54796074-54796697 | Lung | SE_42137 | chr2:54796708-54803360 | Lung | SE_43945 | chr2:54794597-54799592 | MM1S | SE_46220 | chr2:54795768-54803253 | Osteoblasts | SE_47832 | chr2:54799847-54801132 | Pancreas | SE_49907 | chr2:54795402-54803294 | RPMI-8402 | SE_50115 | chr2:54795848-54803359 | Sigmoid_Colon | SE_52386 | chr2:54795955-54803388 | Small_Intestine | SE_53342 | chr2:54795939-54803322 | Spleen | SE_55277 | chr2:54796750-54798969 | Thymus | SE_55277 | chr2:54799481-54802818 | Thymus | SE_56813 | chr2:54795989-54796612 | VACO_400 | SE_56813 | chr2:54796632-54797886 | VACO_400 | SE_56813 | chr2:54798007-54799425 | VACO_400 | SE_56813 | chr2:54799680-54801306 | VACO_400 | SE_57612 | chr2:54799687-54800303 | VACO_503 | SE_60008 | chr2:54784446-54818579 | Ly4 | SE_61167 | chr2:54784367-54847020 | HBL1 | SE_61474 | chr2:54749764-54818736 | Toledo | SE_62304 | chr2:54783676-54846716 | Tonsil | SE_64270 | chr2:54795687-54804439 | NHEK | SE_66257 | chr2:54795484-54802646 | Jurkat |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr2 | 54796074 | 54798684 | chr2 | 54796924 | 54797237 | chr2 | 54799241 | 54799892 | chr2 | 54800045 | 54800558 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I054566 | chr2 | 54794112 | 54810964 |
|
Enhancer Sequence | AGCTTTAGAA GTAAGTCTTT TATAGAATTT GGCTGGGATT TTCCTATTTG CTAGTCCTGC 60 AGTTCTAGAA ATTTGTGAGG TAAAAAAACA GTTTCTTTTC ATATTTACCC ATTGATATTA 120 ATGGAGAATC ACAAAAATAC CCTGGGTCAG TTTCTCTAAA TTATTCCAGA ATTTCAGCAT 180 GATGTCCTGG GAAGTAGAAA TTTATGAGTC CATACCTGTT TTATGACTTA AACCTTTTAA 240 ATACTTTAAA ACTATTTTTT TCAGAAACAA AGCACAAATA CTCTTCTTCA GCCACACTTC 300 ATCTTAGTAG AATGATCCTA TATTAAATGA ACGTTCCTGT TCTTGCAGTT GGTTAGACTT 360 CAGTCTAGTT TCATGCACAT CAAACTTACC TAGTGGTGCC TTCAGGTTTT AGCGCTAATA 420 GTGGATTTGA AGTATGTGAA ATATCTGTTA CATGGTAAGT GCTCATTTCC TCTGAGTTTG 480 TAGGTGAAAC TTTAAAATTA CTGGTTATTG ATTGGGTAGG GGAGAAAAAA CACCTGCTGA 540 AACTTGTTGG CCGGAAGTTT TTACCCCTGG GAAGAAGAAA GGAACGGGGT GGGGGAGATA 600 AGGGAATTCA GTTCTTGGCT GGCAACACTC CAGAACCGTC CTGATGGAAG GGTTGTGGCC 660 AGTTGAAAGC AGCAGTACTG GAGAGGGGAC TGGGGGTTGT TCTTTCAAAG GCAGGGTTGA 720 AGGTTATTAA TGGACTAAGT TAAATTTCTA GCTGTTCCTT CCTGTTACTC TAGATACTTT 780 TTATATATTT ATTATGTCAC AGCAGTATTG ACGCCCTGAA AAGAAAGAAA AGTGAAAGAA 840 TAGTTCACGT AAGATCCCAC AAGTCCTACA AATTTTAACT TTCCAATAGT TAATATATAT 900 AAGCACACAC ATATACACAC ACGTGCAGTT TAGAAGTGTT AATATAGACG AGTTTTGTCT 960 TGGCTTTTTA TTTTTTACTT AACATCATCT TAAGCTTTTC ATATGTGGTT ATTTCTGTGC 1020 CTCTTACCAA ATATTGGCAA TTCACTTTCC AAATCAGACA ATTACTTACC AGTCTGAGAG 1080 CCTGCTTCTC ATCTATGGGA TGAAGGTCAT ACAAATTCTG TGTAATGAGA TTGTTGTAAG 1140 AATTAGGTGA GATTCTGTGT GGAAACTGTG TTTGGCACAG TCCCTGGTAC ATAATAAGGG 1200 CTCATAGGAT TATTACAGAT CCTAGTTAAA TGGCAAGGCA GGGCCCAGCA GGGTGAGCCT 1260 TGTAAACTTG AGTGCCTCAA CTCCCACCCC CACCCCCAAA CCTGTTCTGG GTGTGGTTTC 1320 CTTTAGCATG TTGGGAGAGT GTTTAGTTTG CCTGAAAATG CACCCAACTG AAACCATTCC 1380 CCCCCCCCTT TAGAAAGATT AGAAGGTTCA GTCACTTGGG CCTGGTGACT TTTGATGTAG 1440 TTTGAAGGTC ACAATGCTGG TTCCTCTCTC AAGTTCATAA AAGCCTCTGG AGCAGCTATT 1500 GCTGCAGCCA GCGAGCATCC AGCACTTGGT CAGAGAGCCG CCTTTGTCAG AGAGCGCTCC 1560 TGTAGCCAGA CTCATATTAA CTGCCCCCCA TGGGTGTGTT GAATGCCTCT ACTGTGTTTG 1620 CCTTTGAAAG GCCCTTCTTA GCCTTTCTCT CTCCCCCAAC CCCATTTTCA AGAGGCACAA 1680 GACCTTTAAG TAGCAAATAC AGTAATCACA GTAGCATGGA GACACAGGCT GGCCTATATT 1740 TGGTTTCACA AAGGCCTTGT GAAAGATCTG GCCTTAAAGT CCCTTTTTAA TGCTGAAATT 1800 ATGCAAGTGG AAAGTTAATT TGAGGATCAC TGAGGCACGC TTTATTCATG AAGAATGTGA 1860 GCAAAACATA AATACAAAGT CTGGAGGCTC TGTTCTACGC TGGTGGCAAG GAAATTACAT 1920 AGGTGGTATC TTTATTTGGC TGAATCCCCC TCCCTCCACC AAGAGTGCAA CTGTGATAGA 1980 ATTTTGGAGT GAGAGCTATT GTTTTAAGCA CTGACTGGTT GCAGGTGTGT GTGTGCATGT 2040 TGCCTGAAAC TCTCTACAAA CCATAGACAT GATTTTGGTG GAATTGGCGT GCCAACAGTG 2100 GTTACAGCTA AGATTGTAGA AGACCAAACA TTCTGTTGGA ATGTGACCTT AACATTTTGA 2160 ATTATGTTTC TTAAGTAAGA TAAATTTCGA AGGTCTATTT TATTTTTATC TTTATTCTTT 2220 GAAGGCCTGC TTTAAAGTTT ACCGTGTCTT TGAAAGTCTA GTCTGTTGAA CTCTTAAATC 2280 CCAGTGAGTT CCTATAGATT GCTAGCTTGA GTGTATAGTA TTTGAGATGT GAATAAAGTC 2340 TAGTGCAAAG TGTGTTTCTT GTGCTTGAAA ATGGTGCCCT GATTTCTGTT GAGGGAGACG 2400 TTTATTCCTA TAAAGGTTTA AACGACTTGC TGTACAATTC AGTCTTGCAA TGACAGAGAG 2460 ATTACACACT ATCTGCAAAC AACTGCCAAG CAGATGAAAT CCTGGCTGTG GGAAGTCTGC 2520 GGTGAAGAGT GGTGGGGGTG GTCAGGAGAG CAGTGGAAGG GAAGTGGCTC AGAACATTGT 2580 AGTGGTGGTT TGGCGTGCCT GTCAAGGGCT GTGGGACGTT TTCTCTCTCA TTTCAGAAAC 2640 AAGGGTGGTG GGAAACACAT GGGCCGTGGA TTTGCATAAA CCAACAGTCA AATCCTAGCT 2700 CTACCAGTGA CTTCACTGAG CCTCATTTTC TTCAGGGGGA AAGAATAAAT AGCCCTTGGG 2760 GTGATTGTAA AGCCTAATTA GGTATGTTAT AATTGTATTA AGAGGATGAC GAGTTCACCG 2820 TTTGCCAGGG AGTTTTCCGG TTTTAGTGCC AAACATTCCA CATCCGGGGA ATCTTCCTCA 2880 GTCCCAGGCA CACTGGGTGG TGAGTCCCCC AGTTATATAT GAAGATACCT ATTACTGTTC 2940 CCTAATTGTA TGTACACACA CACACACACA CACACACACA CATACACACA CACACACACA 3000 CACACACATA TCTATAAATA AAGGGCTTCT GGAAGCTGGC TGCCTATTAC TGTGTACCTG 3060 ATACTCAGTG GGTATTTGTG AACTCCCAGG AGGATAGTGT GTTAGTGTGT TTGCGTGTAT 3120 CTCTGTATTC CTTCTTAGGG ATGGCATACA AATAAATGTT TCATGAATAA AGGGATGAAT 3180 GAGTAGGTAA AGTAATATAA GCAGTAATGC ATATGTTTTA AAGTGATTTA GCTGGTTTTC 3240 CTTCCAGGGG CCTCTTCCCT GAGAAAAGAG CCACTTAATA AATGATGTCT TGAATGAAAG 3300 AATACATCAT GAAAATAATT TTGTCCATGA TGTGGCTAAA CTAAAACTCC AGGAAGGGCT 3360 TAGGCTGGGC CTATCTACTT TTTTTGATAA AATGAAGTTT AATATGACCC TAGTGACAAC 3420 CTCCCCTCAT CCCCTTAAAG CTCAAATTTA GGGAACTCTT GTGGTTGGAC TCTCACATAC 3480 TCCCTAGGAC TCTGCTGGGT GCTGGGGAAT TTACTAAACT TTGGTGAGGA GAAGAGGAGA 3540 GGAGAGGGAA GCCACGGTAC TAAGGTACTT AGGGAGACAG AAACAGTTCC CCTAGAAATT 3600 AGACATCACA TTGTCTTTTT CCCCCCTTTC TTTTGAATGA GATGGGGCAA GAATATTTGG 3660 ACCAGGATAA AGTTTTAAGA TGCATTTACA CTAATGTAAT CAGGTTACAT AGCAAAAAAA 3720 TGTTAAAAAT GTACCCTGGG AAATTGAAAT CTATCCATTC TTCTAGGTGT GGCAGCTTAT 3780 TCAGATTTTT ATGTTGTGTG ACCATAAAAC GAACACAGCT TTTCTAACCG CGAGTGTCTT 3840 TGTTTACAGA GATAACAGTG TGAGTAATGC TTTGCTAGAA GCCAGGCAGT TAAATCACAC 3900 TCTGAGCAAA TAGAGGCTGG GCTTCAGAAA CTTAGATAGC ACACGAATGT GCAAACTTGG 3960 TCTTTTAAAC TGAAGACATA TCTGAAAGAA AACTGCTTTT GGCCCATGAA CTACTTTCCC 4020 AGCCCTTTGT GCCTCCCAAT CTCTGCCCCC CTTTACAAAA AATCTTTGTT TTTCCTCTAC 4080 AAATATACAT ATATGATTTC AATTTGGAGG TGGGATGTTA TTTTTTTCAC TTGAAACACA 4140 AGGAAGCAAT TTTTAAAAGT CATACTCGTT CAGCAGTGGG CTTGACTGTA GCCAGTTTGA 4200 CTAGGAGTTC TTGGCTACAG AACCATACAC TTGCAGTCTT TATCAGGGTA GTAAATTCAG 4260 ATGGGTTTTT GGAAAGGGAG AGGGCTGGAG TTGAGGGAAG GGCACTAGAG CAGTGTGACC 4320 CACGGCCCAG GAGCAGTGTG AGTGGGAAGG GGCTCTAGAA GCTGACTGCC TTTGTGTTTG 4380 CCACAGCGTG CTGGGAATCA GATGAGAAGG CGGGCCCAGA CCCCACCAGA TACTCATCTC 4440 AGCCATTGTT GTCATTAAAT GACTCTGAAA TGACCTTTCT TACCTCAGTT TCCTGTGAGC 4500 TCATAGTTGT CTGCAGATGT GAATTATGTC ATTGATCTTT GCTCCCTCTT TGCTTATAAG 4560 GAGTAGCTGT TCTGCTCCAT GTTTCTGGAA GAGGAAAGTG ATGCACAGGT CACTTAGTAA 4620 AGCGGTCCCC AGCCTTTTTG GCACCAGGGA CTGGTTTTGT AGAAGACAAT TTTTCCACAG 4680 ATAGGGTGGA GGAAATGGGG AGTTGGTTTC GTGATGAAAC TCTTCCACCT CAGATCATCA 4740 GGCATTAGAT TCTTATTAAG GAGTGGTAAC CTAGATCCTT TGCATGCACA GTTCATGATA 4800 GGGTTTGGCT CCTGTGAGAA TGCTGCTGCT GATCTGACAG GAGGCAGAGC TCAGGCAGTA 4860 ATGCTTCCCA TCCACCACTC ACCTCCTGCT GTGTGGCCGG TTCCTAATAG GTCACGGGCC 4920 AGGACCAATA CCGGTCTGTG ACCTGGGGGT TGGGGACCCC TGACTCGGTG ATTCAGCAGT 4980 TGATTTGGGA TCCTCTGTCT TTGTTCCTCC TCCCTCAGCG GGAATTCACA GTGTAACTCA 5040 TTTGCTAAGG TTTTCTGCGT TAGAAACAGA ACTCCTTTTG GACTACTAGG AGACATGGTC 5100 ATTAGAATAA TTATGATTCT TAGTATGACT CAACCCCTTT TTAATATTCA GCCTTATGGA 5160 GGGCCTCTGC CTGCGGCTCT TTGCTCAGGC ACTAGGGCCA CAGGGGTGTA ATTTCTATCT 5220 CTGCCCTCAG GAAGCTCACA AACAAGTCAA GAGACAGGAA AACGGATCCT GTTTTTCTAA 5280 TGGGATTTGA ATGGATGTAT TTATGGGAGG GGGGTGCTTT GTACACCTGC AAAACAGAAC 5340 ACCAGCCCTC CCTTCTCCTC TGGGGTTGCT GTGAGAATCA GTTAGAATAA TGTGCATGAA 5400 CCCCGTATGG AAAATACAAA CTCATAATTA AATCTAAGAA ATTTTTGTGG GGGGACACAA 5460 ATGTTGGGGT TGTCTTTGTT CTCAGGTCCC CTCAACTGGT CTAATGAAGG AAACAGACAC 5520 CTTTCCAGTA ACAATAGCCA ACATTTATTG GACACTTATG TACCAGACTG TGCTATTTAT 5580 GACATACATT ATCTAATTTC 5600
|