| Tag | Content |
|---|
EnhancerAtlas ID | HS049-04292 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr19:57223750-57225120 |
Target genes | |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX1 | MA0509.2 | chr19:57224173-57224189 | AGTTGCCATGGAAACA | + | 6.59 | | RFX1 | MA0509.2 | chr19:57224173-57224189 | AGTTGCCATGGAAACA | - | 6.61 | | RFX2 | MA0600.2 | chr19:57224173-57224189 | AGTTGCCATGGAAACA | - | 6.88 | | RFX2 | MA0600.2 | chr19:57224173-57224189 | AGTTGCCATGGAAACA | + | 6.93 | | RFX5 | MA0510.2 | chr19:57224173-57224189 | AGTTGCCATGGAAACA | + | 6.82 | | RFX5 | MA0510.2 | chr19:57224173-57224189 | AGTTGCCATGGAAACA | - | 6.85 |
|
| | Number of super-enhancer constituents: 2 | ID | Coordinate | Tissue/cell |
| SE_07615 | chr19:57223080-57225629 | Brain_Hippocampus_Middle_150 | | SE_08726 | chr19:57223241-57225115 | Brain_Inferior_Temporal_Lobe |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH19I056711 | chr19 | 57223081 | 57225629 |
|
Enhancer Sequence | ACTTTTCAAT ATAGCTTAAT AATAGGAGCT ATGTGCCTGT TGGGCACTGC ACGACTTCTC 60
ACACTTTGGA ATCAGCCTGG AAAATGTCAT CCTCAGTTCC TTGTCTTTGC TGACTTTTAG 120
GTGGTACTTG CTGTTCTTCA CAGCGACCAC TGACAACCCA GCATCACAAA TATGTGATGT 180
GAGCAAAAGG AAATGTAGAG GGATCTAATG TGGAGACTGT GAGCCTCTGG AGCTGGTAGT 240
TTGTGTGATG CATGATGATA TAGAATATTG CTGTGGTTCC TTTCCATCGA AAATATAGCT 300
ATTCCTCTGC CGACATTTGC AGCTGTGAGA ACAGAACGGC AGGAATGCAG TAGGTGTTCA 360
TTGGAGGGGT CGAGTGGAGG AGCTCATCTG GTTGCCAGGC ATTGCTCAGT GTCCTTGGAG 420
ATGAGTTGCC ATGGAAACAG TGAGGGGCAG AGAGGAGGGG CCGTTCCTTT CTAGCCAAGT 480
GAGCTGCAGA GACGAAGGAA AGTGAGGCGG ACGTCCCACA ATGTCTTAAA AATCCTCTCC 540
CATTGACACA TTCAGATGGC CTCCATTTAT AATTTCATGT ATATCTGTTC TGCCTGTGGT 600
TTCCAAAAAG CAGTTCAAGG CCTGCTAGGG GAATCAAGAC CCTTTCAGTG TTCCAAACTA 660
TGTTTCTAAG ATCAGGGAAA TTGTATTTGC TTTTTTCCTT CCCATTTCCT CTGCATGATG 720
TAATATTGCA GGTGTTTGAA TTAAGTAGTC TATCCGGCCA GCAGTTTTTT CATGGGGAAA 780
AAAAACCAGA ACAGAATTAA AAAATCAGAG CATGTGGCTT AGAGTAAGTG CCATTCCTTT 840
AAACTTTCAC TTCAGTTACA CAGACATTTA CTCACAGACA CACACACTTG CATGTGCACT 900
GGATCAACAT GGAGAAGGTG TGGGTTCCTG GGGCCTGCAG TGACCAATTT TTTTTTTTTT 960
TTTTGAGACA GAGTTTTGCT CTTGTTGCCC AGGCTGGAGA GCAATGGCGT GATCTTGGCT 1020
CACCACAACC TCTGCCTCCC GGGTTCAAGC AAATCTCCTG CCTCAGTCTC CCGAGTAGCT 1080
GGGATTACAG GCATCCCAGC CACTATGCCT GGCTAATTTT GTATTTTTAG TAGAGACGGG 1140
GTTTCTCCAT GTTAGTCAGG CTGGTCTCAA ACTCCTGATC TTAGGCGATC TATCTGCCTT 1200
GGCCTCCCAA AGTGCTGGGA TTACAGGCGT GAGCCACCAC GCCCGGCCTT GCAGTGACCA 1260
AAGTTTCAGT GGTGCTGGTG TGAGCCAAGC TTCCAATTTT CACAGACACG GACTCAGGGG 1320
TGATGCTGCA GCTGCAGTAG TTGATAGCTC AGGGCCCATA ACCAAGGGGA 1370
|
