Tag | Content |
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EnhancerAtlas ID | HS049-03989 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr19:18228580-18230970 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
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TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EGR1 | MA0162.3 | chr19:18228781-18228795 | CCCGCCCCCGCACT | + | 6.21 | EGR3 | MA0732.1 | chr19:18228780-18228795 | CCCCGCCCCCGCACT | + | 6.83 | EGR4 | MA0733.1 | chr19:18228780-18228796 | CCCCGCCCCCGCACTC | + | 6.16 | IRF1 | MA0050.2 | chr19:18230233-18230254 | TGTGGGTTTCACTTTTGCTTC | + | 6.67 | KLF16 | MA0741.1 | chr19:18228599-18228610 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228764-18228775 | GCCCCGCCCCC | + | 6.02 | KLF16 | MA0741.1 | chr19:18228779-18228790 | GCCCCGCCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228599-18228609 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228764-18228774 | GCCCCGCCCC | + | 6.02 | KLF5 | MA0599.1 | chr19:18228779-18228789 | GCCCCGCCCC | + | 6.02 | SP1 | MA0079.4 | chr19:18228761-18228776 | CAGGCCCCGCCCCCA | + | 6.56 | SP4 | MA0685.1 | chr19:18228761-18228778 | CAGGCCCCGCCCCCAAC | + | 6.57 | Zfx | MA0146.2 | chr19:18228761-18228775 | CAGGCCCCGCCCCC | - | 6.19 |
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| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_03607 | chr19:18228860-18229540 | Brain_Angular_Gyrus | SE_03607 | chr19:18229563-18230152 | Brain_Angular_Gyrus | SE_04405 | chr19:18228707-18231550 | Brain_Anterior_Caudate | SE_05422 | chr19:18228732-18231107 | Brain_Cingulate_Gyrus | SE_06334 | chr19:18227733-18231497 | Brain_Hippocampus_Middle | SE_07235 | chr19:18227822-18231343 | Brain_Hippocampus_Middle_150 | SE_08343 | chr19:18228675-18231084 | Brain_Inferior_Temporal_Lobe | SE_10753 | chr19:18228829-18231042 | CD19_Primary | SE_19731 | chr19:18228750-18231627 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_22919 | chr19:18228828-18231785 | CD8_primiary | SE_60731 | chr19:18199190-18231325 | DHL6 | SE_62682 | chr19:18196873-18231497 | Tonsil |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr19 | 18230044 | 18230277 | chr19 | 18228597 | 18228694 |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I018117 | chr19 | 18228011 | 18232079 |
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Enhancer Sequence | AGGTTAAGGT GCTGCCAACG CCCCGCCCCC GCCGCCCGCG GTCGTAGCAA CGCCCGGCCT 60 CAGCCGCCCG CGGCCCTAGC AACGCTCCGC CTCTCCGCCC GCGGCCATGG CAGCGCCCCG 120 CCCACTCGCC GGCACGCGGG TCCGCCGGCC TCGCTTCCGC GTCGCTCGCT CCGCCTCCCG 180 ACAGGCCCCG CCCCCAACGG CCCCGCCCCC GCACTCGCCT GGGCGGAGTT CCAGTCGCGC 240 TCGGGGGCGC GCGCTTCCTT CTCGCCGCCC CCCCATCCCC GCAGCCCCGT GCGCCCCCCT 300 CCCTGTCCGG CTCCGCGGGG CTCCTGGGGC CGATCCCACC GCCGAGGCCT CCCTTCCCGG 360 CCTCGGGCGG CTGCGGCGGC ACAAAGGGAA GCAGCATGTC CGACCCCAGC TACTGGACGG 420 CGGTGGCGGC TCCCGGCCAT CGGAGCCGCC TGGCAAAAGG CGCGCTGCTG CAGCGCTCCA 480 AGAGGTAGGG GGCACGGCGC CGGCGAAGGC TCGGCGGCCA GCCGAGCAAA CAGGAGTTGC 540 CAGAAGTGTG TCCTGGCCGC GTGGCGCGGA CCACGGCGAG CGTCTGTCTG TGGCAGCAGT 600 GGGAAGGGGG GAGGACGCCT GTGGATCGAG GTGTCCCCTG GGGTCCCTGG CACCCTCCTT 660 TCGCCCCTCG TTCCCTGGAC TGGGGTGTCT GTCCGCCAGC GTCGCAGCTG GGGTGGTGAC 720 AGACAGGAGT GAGTTGAGAT TGAGCTAGGA TTTGAACCCG GGTGTCCAGG GCTGGGCAGA 780 ACCAGGGAGG AACTTCTTGG AAAAACTGAG GCTGATCTGC CGCTGGGGGT CCATTCAGCA 840 GAAATGTTGG CTCAGAAGCA AATATTTACT GCACGAGGCT GGCATTTGGG TGGGGTGTCA 900 GGAGTCCAGA TAGTTGGGGT TAACCCCCGC CAAAGCCTCA CCGCTCTTGG AGTCTCAGTT 960 TCCCCTTTTG AAAAGCAGAG AGGATAAGTG AGGGCTGTGG ATTCTACCAG ACCTGGGTTC 1020 AAATTTCGAC TCAGCCACTA CCAGGCTGTG TGACCTCAAG TAGCTCCTTA ACCTCTCTGT 1080 GCTTGGGTTT CTCATTGGTG CTGGACTGGG GCAAAGTCTG GGCGGTGGGA CCAGCTACCG 1140 AAAGACCTTG AATGCTGAGT CCAGGGCTTA AACTTACCTC CAAGATCGTG GGGAGCATTG 1200 GAGGGGGAAT ATGGGTGCCA GAGGGATGAG GTGCAGGAGG CTGGCTTCAG GCCCCTGCTT 1260 TCTGCCACAT TCTCTCTGTT GTGTCCTGGG TACCAAGAGA GGATCGTTCT CAAATGGCAA 1320 CTTCTCGAGG TCCTGGATCT CCTCCAGGAA GAGTTGAACA AACAGTCGGC CCTGCATAGA 1380 TGCTTGGGAA GTGAACAGAT GATGCTTAGT TCTCCTTTGA GGCCTCACAT TTGGCCGTGT 1440 TTTCAAGAAG ACCTCGCCCA AGAACAGGAG GGAGGGCAAC GAAGTGTTTT TCCCAAATGC 1500 TTTTGGAAGC AGCAAGTGAT ACAGCAGGAT CGGGGAGGGA GGGTGCTGGT GGTGCAGTGT 1560 GGGGGCGAGG AACCAGGTGA GGGGCTGGGA GAGGATGTGG AGACAGCCAG GTGAGCGTGC 1620 ATTGAGGGGT TGGCAGGAAG TTTTGCAGAA ACCTGTGGGT TTCACTTTTG CTTCTGCAGC 1680 TCAGGCTGGG AGACAATCAC TGTGACTGTT GACATCTGTG GCTTCAGTTT CCCAGTCTGG 1740 AAAATGGGCT CAGCTGGTCA TTCCCAACTC TGGGGCTTGT TGGAATTGGC AGATGTTGGG 1800 GATGTAATTC ACTCAGGAGG CACTGGCTGC CCTCCCGGCG TGAGCCAGGC CCTGTGAGCA 1860 TTGTCTAGGC AAAGACAACA GTGTATGTAC CCGAGTCCGA CCCAAAGCTG AGCACTGGAT 1920 GTGGTAGGTT TCATCCTTCA AGGTAGAGAT GAGGAAACAG GCTCAAGGGG CAGCCACATG 1980 TGGAGACGTA GACAGGCTGG GCCTCTTCTC CCTGCCCACC TTGTCACCTG TGTCCTTTGA 2040 TGATCATACG CTTGTTCTCC CATGGATTGA CCTGCTCCGA GCATTCTGCC TGGGACCCCA 2100 TTTCTGCACC TCGGAGGCCC CGAGACTTCA TCTCTCCCTC CCCGCGAGAT TCTCCCGCCG 2160 CTGAGCTGCG TTGGCGGCTT GGGGTGTGTG GGCTGATGCT CTTGTGGAGC AGAGCTGTTG 2220 CTGGGCAACT GCTCTGGTGG GGCGGGGGAC GGTGTCGCTC CCAACTTCCT TCTGTCAAGG 2280 TGTGGGCTGA GGCCAGGGCC CAGGTGGGAG AAGAAGCCAG GCAGGGTGTG AGAGACCTGG 2340 GCCAGGGATC TGGTGGCCAG AAGGGAACTG GGATGGAAAG AGGAAAACGT 2390
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