| Tag | Content |
|---|
EnhancerAtlas ID | HS049-03258 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr17:27907350-27908350 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr17:27907499-27907518 | TGGCCACCAGGTGGCACCA | + | 9.7 | | IRF1 | MA0050.2 | chr17:27907778-27907799 | CTTCTGTTTCTTTTTCTTTTT | + | 6.6 | | Zfx | MA0146.2 | chr17:27908040-27908054 | CCCGCCTCGGCCTC | + | 6.01 |
|
| | Number of super-enhancer constituents: 9 | ID | Coordinate | Tissue/cell |
| SE_03576 | chr17:27906928-27907885 | Brain_Angular_Gyrus | | SE_03576 | chr17:27908000-27908734 | Brain_Angular_Gyrus | | SE_04273 | chr17:27904200-27907921 | Brain_Anterior_Caudate | | SE_04273 | chr17:27907957-27916339 | Brain_Anterior_Caudate | | SE_05259 | chr17:27903394-27916333 | Brain_Cingulate_Gyrus | | SE_06486 | chr17:27903728-27916430 | Brain_Hippocampus_Middle | | SE_08195 | chr17:27903857-27916430 | Brain_Inferior_Temporal_Lobe | | SE_08898 | chr17:27907600-27907798 | Brain_Mid_Frontal_Lobe | | SE_08898 | chr17:27908106-27908415 | Brain_Mid_Frontal_Lobe |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH17I029579 | chr17 | 27906961 | 27909521 |
|
Enhancer Sequence | GGTCTGGAAG AGGTCTGGGT TTAGGATCTG AGTCGCCCAG GCCTGGTTAT GCCCATCTGC 60
CCACACAGGC CCTTGGGGAG GAGAGCACCT CCTCTCTCCA GATCCAGGCC AGCAGGCACA 120
GCCTGGCATG AGGACATGGC CATCAGAGGT GGCCACCAGG TGGCACCAGC ATCCATCTTA 180
TGTGCTGGGT GAGTGGCAGG GGGTGTCCCA CACTGCCTCT CAGACGGAAG CAGAAACACC 240
TCATTCAACC AGCCTCAGCG CACGTGCCTA ATTCTGAGCA CGCTAGAGGC CTAGCCAGCA 300
GTCACAAAGT TAGTCACATC CCTGAAGCCC ACCCATCTTT TCAGCGAAGA GCAGAGGCTT 360
CTCTAAAGAC AGTGGGGTCG GTGCCACTGG GACAGAACCC AGTGGCCCAC CCTCCCAGCC 420
GGAGGTAGCT TCTGTTTCTT TTTCTTTTTT TTTTTTTTGA GACGGAGTTT GGAGTTTTGC 480
TCTTGTTGCT CAGGCTGGAG TGCAATGGCG TGCTCTCGGC TCACCGCAAC CTCTACCTCC 540
TGTGTTCAAG CGATTCTCCT GTCTCAGCCT CCCGAGTAGC TGAGATACAG GCATGCGCCA 600
CCACGCCTGG CTAATTTTGT ATTTTTGGTA GAGACGGGGT TTCTCCATGT TGGCCAGGCT 660
AGTCTTGAAC TCCCGACCTC AGGTGATCCG CCCGCCTCGG CCTCCCAAAG TGCTGGGATT 720
ACAGGCGTGA GCCACCGCGC CCGGCCCACA GGTAGCTTCT CACACCCAAG CCCTCCATGT 780
ACTTGACAGT CACGGGGCTC AGGCTATGCG GGCCACATAT GGAGCTGACA TTTTTTACCT 840
GCCTTGGGGC CCAGCATTAG GGACTGAGGA CTAAGCTGTG CCTCTAGTCT CTGGGGGGAG 900
GGAGCAGGGT CCTAGGCCTC TGAAACCTGG GCTGGGAGCT CTGGGGGTCA GCCACCCACA 960
TGGCATCCAA CAGCCTCTGG AAAGGGGCAT CAGGTGGGCA 1000
|
