Tag | Content |
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EnhancerAtlas ID | HS049-01777 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr12:49607800-49610260 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr12:49609699-49609720 | AAAAAAAAAAAGAAACTACAG | - | 6.37 | Nr2f6(var.2) | MA0728.1 | chr12:49608308-49608323 | TGAACTCCTGACCTC | - | 6.22 | ZNF263 | MA0528.1 | chr12:49609882-49609903 | GAAGGAAAAGAAGGAGAAAGA | + | 6.12 | ZNF263 | MA0528.1 | chr12:49609879-49609900 | AGAGAAGGAAAAGAAGGAGAA | + | 6.41 |
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| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_03427 | chr12:49608424-49609423 | Brain_Angular_Gyrus | SE_03427 | chr12:49609629-49610261 | Brain_Angular_Gyrus | SE_04162 | chr12:49607174-49610612 | Brain_Anterior_Caudate | SE_05204 | chr12:49606287-49610507 | Brain_Cingulate_Gyrus | SE_06899 | chr12:49607358-49610751 | Brain_Hippocampus_Middle_150 | SE_08188 | chr12:49607176-49610737 | Brain_Inferior_Temporal_Lobe | SE_29656 | chr12:49608366-49609530 | Fetal_Muscle | SE_33510 | chr12:49607172-49610551 | H2171 | SE_37133 | chr12:49607836-49609988 | HSMMtube | SE_55070 | chr12:49607191-49609780 | Stomach_Smooth_Muscle | SE_63429 | chr12:49581126-49628992 | NCI-H69 |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr12 | 49608440 | 49609355 | chr12 | 49609745 | 49609817 | chr12 | 49608800 | 49609192 |
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| Number: 2 | ID | Chromosome | Start | End |
GH12I049212 | chr12 | 49606556 | 49609583 | GH12I049215 | chr12 | 49609630 | 49610261 |
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Enhancer Sequence | GTTTCAGAGA TTTCTGATGA GTGGTGTTTA AGAAATCCAA CCTGTTTGGA CTGCAATCAA 60 GGTTAACTAT TTTCTTCTTT GGCTAAATAG GAAATCTATT TTGCTGGGTT TTTTTTGTTT 120 GGTTGGTTTA TTTTTGAGAC GGAGTTTTGC TCTGTCACCC AGGCTGGAGT GCAGTGGCGA 180 CATCTCAGCT TGCTGGAGCC TTGACCTCCT GGGCTCAAGG GATCCTCCCA CCTTTGCCTC 240 CAAGGTAGCT GGGACTATAG GCTCACGCCA CCACGCCTGG CTAATTCTTT TTCTTTTTTT 300 TTTTTGAGAC AGAGTCTCGC TCTGTCGCCC AGGCTGCAGT GCAGTGGTGC GATCTCGGCT 360 CACTGCAACC TCCACCTCCG GGGTTCAAGC AATTCTCTGC CTCAGCCTCC CAAATAGCTG 420 GGATTACAGG CACCCGCCAC CAGGCCTGGC TAATTTTTTT GTATTTTTTA GTAGAGACAG 480 GGTTTCACCA TCTTGGCCAG GCTGGTCTTG AACTCCTGAC CTCGTTCCAC CTGCCTCAGC 540 CTCCCAAAGT GCTGGGATTA CAGGCATGAG CCACTTTGCC TGGCCTAATT TTTGTATTTT 600 TAGTAGAGAC AGGGTTTTGC TATGTTGCCC AGGCTGGTCT CGAACTCCTA GGCTCAAGCG 660 ATCCGCCCAC CTCAGTCAGT CTCCCAAAGT GCTGAGATTA CAGGCGTGAG CCACCACGAC 720 TAGCCTTGTT CTTCTTTTAG TGTTGGTCTT GTGGCTGGTA CTCTCCTAGG GGCCAATATC 780 CTGGCCCTCT TGTCTTTTGG TGATAGTTAT TAGAGTTCCT GAAGCCATGT CCAGGCAGGT 840 CACTGCCCCC ACCCCTTGAG CAGTTGCTGT TCTGGGGAGG GTATGCCTTC CCTGCTGCTC 900 AAAGAATCAA CCCTTCCTTC CTCAGCTAAC ACTTTCTATA CAAGAGGATT ACTTAGGGCT 960 GGGCAGCTTC AAAAGGCAAT TAGCATAAAG TGGGAAAGCA GTCCAGTCTC AGAACCTGGC 1020 AACTAAAGGG ACTGTAACTC AAATTACACA TCTAAATGTT GGGAGTAGGA AACAATGAAA 1080 GGGAGCAATT GCTTAGTGGA CATTTTAAAA CTATACTCCT AAAGCAGCAA CCCTGTCTTT 1140 TTTAACACAA AGTAAAGGAC ATGGTTAAAA AGCTCTTCTC AGAAAGCAGG TGGGATTGAA 1200 GAGATTTATT TATGACTTAC TGGAAGCACA AAGAGAAGCT TTTATTGTTG ATAGCTAGGC 1260 TGGGTAAGTG CCAGGAGACA CATCCCAGGG GAGCTGTGCT GCCAAGCACT GACACACAGA 1320 GAGCTGACCC AGTCCTTTTT TATGCTGACT GCTTGCTAAG AAATGGTAGC AGAGGACCGC 1380 ATGGAAAGAC CCAATGTGGT TTAGAACAAT TATGGAGACT TTAGAGTGAT CCTGATTTTA 1440 AGGGACCATT TGAAGGGAAA TAGAGAAACA GTATATTCAT CAGATTTGTG CAGAAGTACT 1500 GTTGAATTTG TTTAGGGAAA CTGCCTTGAA ATCACTCTAC GTGACCATAC ATTCAGTGTT 1560 ATCATCCTCC TTGTTTTTTT GAAACTACAG ATTTAGGCCG GGCGCAGTGG CTCACGCCTG 1620 TAATCCCAGC ACTTTGGGAG GCCGAGGTGG GCGGATCACC TGAGGTCAGG AGTTTGAGAT 1680 CAGCCTGGGC AACACGGTGA AACCTTGTCT CTACTAAAAA AAAAAAAATA CAAAATTAGC 1740 CGGGCGTGGT GACACATGCC TGTAATCCCA GCTACTCGGG AGGCTGAGGC AGGAGAATCG 1800 CTTGAACCTG GGAGGCGGAG GATGCGGTGA GCCGAGATCG CACCATTGCA CTCCAGCCTG 1860 GGCAACAAGA GTAAATCTCC ATCTCACCAA AAAAAAAAAA AAAAAAAAAA GAAACTACAG 1920 ATTTAAATTC AAGCTTTCAG CAAATGCCTA CCAGAGACCC CAGGTTAAAA AATGTAAGGA 1980 GCACATTATT GTAACCAATA TATTTAGGCT TAGAAAGATT TTTCAGATTC TGAGCTGAAA 2040 GTCAGAGGGA GAGAGGGACA GGGTGTGCAT ACAGGGGGGA GAGAAGGAAA AGAAGGAGAA 2100 AGAGTGATTT TTGAGGGAAA TAGTAACCTA AAGCCCAAAA CAACGCACAG ATTTTGTTAG 2160 ACTCAACAGA GTCATGAAAT GCCAGTGTGG AAAGAGCTTG AGAGATGGCA TCCCTGTCCC 2220 TCACTGGTCA TCCTACTGAC GAGGAGCCTA GACCAGAAAG TGGAGTGACC ATGCCAAAGA 2280 GGCAGAGCCA GGTGGTGGCG GAACCACGCT GGAAGCCAGG TATGCTCATT CTTCTCATGA 2340 CACCCCTGGC CTCCGTGACC TCGCATCCCA CCTGGCCTGA TGACTGTGGC CCTTTGTCTT 2400 TTGTCCTTCA CTTTAAGAGG TTGTGGCCAA AGGGCCCATA AAGCAGGTGG GATTGTAATT 2460
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