| Tag | Content |
|---|
EnhancerAtlas ID | HS049-00311 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr1:45118230-45118790 |
Target genes | |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| CTCF | MA0139.1 | chr1:45118707-45118726 | CACTGCCACCTGTTGGCCA | - | 7.06 | | NEUROD2 | MA0668.1 | chr1:45118607-45118617 | GCCATATGGT | + | 6.02 | | Znf423 | MA0116.1 | chr1:45118595-45118610 | GCCACCCTGGGGGCC | - | 7.52 |
|
| | Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
| SE_03549 | chr1:45117728-45118587 | Brain_Angular_Gyrus | | SE_04577 | chr1:45117474-45119476 | Brain_Anterior_Caudate | | SE_04765 | chr1:45105519-45119634 | Brain_Cingulate_Gyrus | | SE_05770 | chr1:45105473-45119893 | Brain_Hippocampus_Middle | | SE_06677 | chr1:45117449-45119563 | Brain_Hippocampus_Middle_150 | | SE_07718 | chr1:45105641-45119708 | Brain_Inferior_Temporal_Lobe | | SE_08966 | chr1:45118171-45118407 | Brain_Mid_Frontal_Lobe |
|
| | Number: 2 | ID | Chromosome | Start | End |
| GH01I044653 | chr1 | 45117729 | 45118587 | | GH01I044652 | chr1 | 45118641 | 45118810 |
|
Enhancer Sequence | TCAGAATTGG GTCCAGTTGG CAGCTCCTGC CACCCTTTGC ACCCAGATGA AGCACAGACA 60
AGTCCCCCTT GGAGCCCAGC AAAGGCCCTT CACAGCTCCA CGCCCAGTTT GATGGCACCC 120
AATATCCTGA ACACAGGGAT CCTGGGGATG TACACAGCCT CTGTCGAGGC GGGTGGAACA 180
GCTCCAGCGA TGGCTGAGGG TTTGGGAAAG AAACAGGTTT GGAAGAGAAG AGTGGGTAGG 240
TGAGGGCAAC GGAGAGATGA AGAGGAGGCT CTTAATGCCC AGTTCCTGTC AGGCCGACTT 300
CTTTGATGTC TTTAGTCTCC CCTCCCACAA GCTTGGACTC AGTAGGTCCT TGATGGCTGG 360
TTACTGCCAC CCTGGGGGCC ATATGGTCTC TAAAAGGGGC CATTAACCCA GAGTGAGGGC 420
ATTCCACTGA AGCCCGCCCT GCTGTGGGAG CCTTGAGCTG TCTCATGGCA CAGGCTGCAC 480
TGCCACCTGT TGGCCATGGC TAGGAATGCA GCCACACAGC ATGGGAATCC CTGCCACCAT 540
AGTGGGGACT CACCAAGGAC 560
|
