EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS049-00202

Organism

Homo sapiens

Tissue/cell

Fetal_spinal_cord

Coordinate

chr1:29529030-29529640

Target genes

Number: 8
Name	Ensembl ID

RP4	ENSG00000225616
Y	ENSG00000206704
RP11	ENSG00000225750
SRSF4	ENSG00000116350
MECR	ENSG00000116353
PTPRU	ENSG00000060656
AL645859.1	ENSG00000221550
RP3	ENSG00000230523

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

CTCF

MA0139.1

chr1:29529549-29529568

GGGCGCCCTCTGGTGGACA

7.88

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I029201

chr1

29527693

29530110

Enhancer Sequence

CCATGACAGC CACAGCCACA TTCATGGACA GTGAGGCCTA GAGAAACTGG ACGATATGAT 60
GGAAAGAGAG TAAGTGAGGA AACCGAGTCT ATTACTGACT TGCTGTGTCT TCCAGGGCAA 120
GCTGCTCCCT GAAACTTCAG TTTCCTCATC TGTAAAAGAC AGATGACAAA CCTGCCCCTG 180
TCTCCTTCAC GTCTGTATTT AGCGCACTTC CAAGTACCAC ACAAAAGCAA GGGTAAAGGG 240
GCCTTGGGTT AGACAGTTCA CAGAAAGAAT AATACAGCTC AAATCATTCC CAAATATCAA 300
CTGGGGTTTT GAAAACATGA GGTTATCACA AGCCAAGAGT CTCAGAAAGT CTTAGCTATT 360
CAGTAAGGGC AGTCTCCACC TCCTTCCTGC CCTCTCTTTA CATGTCAGAT TCACTCATCC 420
TATCGCCAAA AGCCAGCTGG ACTTCATTTC TTAGGACTGA CTCATCTGTT TCAGCCGCCA 480
ACTGTTAGCG ATGCCTAAAG CCAGTTTATG CTTATGCAAG GGCGCCCTCT GGTGGACAAC 540
TGGGCACCGC AGGGATGGGA GGTGGGAAAG ACCCAAGACA TGGTCTGGGA TGAAGCCTCC 600
TTCCCCACGC 610