Tag | Content |
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EnhancerAtlas ID | HS049-00144 |
Organism | Homo sapiens |
Tissue/cell | Fetal_spinal_cord |
Coordinate | chr1:23871250-23872000 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
RFX1 | MA0509.2 | chr1:23871770-23871786 | GGTTTCCATGGTTACA | - | 6.18 | RFX1 | MA0509.2 | chr1:23871770-23871786 | GGTTTCCATGGTTACA | + | 6.21 | RFX2 | MA0600.2 | chr1:23871770-23871786 | GGTTTCCATGGTTACA | + | 6.26 | RFX2 | MA0600.2 | chr1:23871770-23871786 | GGTTTCCATGGTTACA | - | 6.31 |
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| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_05716 | chr1:23871014-23872275 | Brain_Cingulate_Gyrus | SE_06239 | chr1:23870894-23872453 | Brain_Hippocampus_Middle | SE_08579 | chr1:23870617-23872379 | Brain_Inferior_Temporal_Lobe | SE_23281 | chr1:23871742-23872672 | Colon_Crypt_1 | SE_34689 | chr1:23871375-23872198 | HeLa | SE_50077 | chr1:23871391-23872802 | Sigmoid_Colon | SE_66590 | chr1:23871745-23872404 | Jurkat |
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| Number: 2 | ID | Chromosome | Start | End |
GH01I023545 | chr1 | 23871743 | 23872719 | GH01I023544 | chr1 | 23871081 | 23871691 |
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Enhancer Sequence | CCTCACCAAG AGGTAGTAAG GATTAGATCT AATATGTGTG TGTATCTGGA TCACAGTAAA 60 TACCCAGGAA AAGAGGTCAT CATTTTTGTT CCTCTCTGAC AATTGCAGCA ACTGGCCGCC 120 AGAGGGGAGT CATGCACTGA AGACCTAAGC CCTTCCCAGG TGACTGGTTG ACCATTCAAC 180 GGTTAAGAAT TGTGCTGGGC CCTTTTATCT CTGTGCCCAA ATGTGGGATC AAGGACAGAT 240 CTCACCAGTA CGGAACTACA AGGATCTTTT GACTCTTGCA AAAGAAATAC AGCTTAGGCC 300 TTAAAACCCA TCTAAGGCCC CTTTACCAAC ACCAATTCTA GGACTGGGAG GGTGGGGGAG 360 ATCCCTGTGG AGGGAGGCCC AGCTGTGTCC CATTTGGTGG TGGCAGTGCT GGGGGAGCAG 420 CAATTATCAG TAATTCCTCT CCTGCTGGAG GCTGGGCTCC TGGAGCCACA GCTGCAAGGT 480 GGGAGGTGGC AAGGAGGATT TTGGAATTGT CTCCCTAAGG GGTTTCCATG GTTACAGATG 540 GATACAGGCA GCCCACTAGG CTGGGTCCTT TCTCCATATT GTCTCCTGGG GAGACAATGG 600 GCTTTGGGGA TGGGGCGGCA TGCCACGCAG ATCATTTCTA GAGCAGGGAC CATGAGTGCC 660 TGCTCTGTGA ACCCCTGGAC CCCAGCTGCT GGGACAGAGG GAGTTGGGCA CAGGGATCAG 720 CCTTGGTAAC CGACTGCTTG CTTTGGGGTA 750
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