EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS049-00065

Organism

Homo sapiens

Tissue/cell

Fetal_spinal_cord

Coordinate

chr1:12112790-12114210

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:12113308-12113329	TTTTTCTTTTTCTTTTTTTTT	+	6.09
ZNF263	MA0528.1	chr1:12112822-12112843	CTCTCCCCTCTCTCGTCCTCC	-	7.02
ZNF263	MA0528.1	chr1:12112825-12112846	TCCCCTCTCTCGTCCTCCCCC	-	7.31
Znf423	MA0116.1	chr1:12113250-12113265	GGACCCCAGGGGTCA	+	6.13

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_32538

chr1:12111224-12119174

GM12878

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I012051

chr1

12111817

12113781

Enhancer Sequence

TCCACCCTGG ATGCTTCAGT TGCCCCTGCC TGCTCTCCCC TCTCTCGTCC TCCCCCTCTT 60
TTCCTGGGCC ATCTATTTCC CACGCAACAG CCGGAGTGAC CCGGACAACC CAAGTCAGGC 120
CATGCCCCTC CCTGATCCAA ACTCCTAGTG GCTCCCATCC CTCTGAGGGC AAAAGCCTTG 180
TTCACTGATG AACCCCAGCA CCTATCCTGG GGCCTGGTAC CCATATGCCT GTAGAAGTGT 240
TTGTTTAAAT GAATATTAAT CCATGGCGTT GCCTCTTAAG CAGGGATGTG TTCCTTTCGT 300
CCAAGCGTTC TTGCTCCTAT AGGCACATTA GACACTGCAG CAAGAGCAGG TCTCATAGGA 360
GTGGTCCTGG CAGAGCCCCA GGTCTTGCTG GGCACCAGGT CTGCTTGACA GACCACACAG 420
GCCTGGATGG TCAAGTGCTG GTCCCTGGAG TACAAGGAAG GGACCCCAGG GGTCAGTGTC 480
TACCCATATC CGTAGATGCT ATCAACAGGT TCTTTTTTTT TTTCTTTTTC TTTTTTTTTA 540
GAGTCAGGGC CAGGCTGACT GTTATTCAGG CTGGAGTGCA GTGGCATAAT CATGGCTCAC 600
TACAGCCTTG AACTCCTGGG CTCAAGCAAT CTTCCCACCT CAGCCTCCTG AGTAGCTTGG 660
ACCGCAGGTG TGCGCCATGA CGCCCGGCCG CCACCAATAT GTTCTTTCCT TGGCTCAGTT 720
CAATGGCCCC TGCAGAGCCG GAAGGCCTGG CTCAGAAAGA ACCCTGGCGC CTGTGCAGTG 780
TCAGTGCAAG CCAAGGCAGT GGCTGCTGTT TCCACTGCCA AGCATGAGAG TGGGACGCCA 840
GCCAGTGGCC GGGCTCAGGC CCCAAGGAAA CACAAGGTGG GCTGCTGCTT TGGGGACGTT 900
GTTTGGAGTC ACTTGAAATG CAAGAGTGAC CCCCAGAACA CACAGGCCCC CCAGGAGGTG 960
GATGTGGGGT AGACAGCACA GGCCATTTCT TGCTAAGCAT TTATTTCCAC ACTATCTCCT 1020
TGGACAGATA ACAGGATTGT TTTCAGGTAA TAGGTAGATA AGCTGGCCGG GCATTGGGGA 1080
TGATGGATGC TGAGTCTGGG AGGCAAGTGT GTGCTCACAC AGATGTGTAC GTGTGTGTGC 1140
ATGTGTGTGT GCCTATGTGT ACGTGTGTGT GCATGTGTGT GTGCATATGT GTATGTGTGT 1200
GTGTGCAGCA CTGAAACAGG CCGCTGACCG CTCCCAAAGC CCTGATGTTC CATCAGCCTC 1260
TGCAGTCACA GCCAAGCAGA CCCTTGAGAC CCCTGCCATC TGCCTCCCTT GCCAGAGTCT 1320
GAAAGCTTGG GGTCAAGGCT TTGCTCCCCT GGTGACAGGC CTGGAAAAGG AAAATGATAG 1380
CAAGCAGCAA ATACACACAA TAAAGCCGGG CGAGGGCAGA 1420