Tag | Content |
---|
EnhancerAtlas ID | HS048-01237 |
Organism | Homo sapiens |
Tissue/cell | Fetal_small_intestine |
Coordinate | chr1:46644560-46646190 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:46645385-46645404 | TGGTGCCACCTACTGGCAG | - | 7.75 | Crx | MA0467.1 | chr1:46645532-46645543 | AAGAGGATTAG | + | 6.62 | IRF1 | MA0050.2 | chr1:46645615-46645636 | ACAGAGAAAGAGAAAGAGGGA | - | 6.03 |
|
| Number of super-enhancer constituents: 8 | ID | Coordinate | Tissue/cell |
SE_23257 | chr1:46644683-46648228 | Colon_Crypt_1 | SE_24097 | chr1:46645072-46645482 | Colon_Crypt_2 | SE_24097 | chr1:46645485-46648171 | Colon_Crypt_2 | SE_31897 | chr1:46645550-46652335 | Gastric | SE_34180 | chr1:46645443-46651019 | HCC1954 | SE_41846 | chr1:46645690-46648609 | LNCaP | SE_50730 | chr1:46644589-46652277 | Sigmoid_Colon | SE_65807 | chr1:46644886-46647151 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | GTGAAGAGGA AAAAAAGCCT TAATATATGC AAGACATTTA AAATAAGATC AGTATTATTA 60 GTGTAGTCTG TAATACTATT AGCCCCTCTC TCTTCTGTCT CTTCAGCTGC CTCCTTTCAC 120 TATAAAAACA AAACAAACTT AGAAATCCAC TTCCTCAGCT AGGCACAGTG GCTGATGCCT 180 GTAATCCCAT CACTTTGGGA GGCTGAGGCA GAGGATTACT TGAGCCCAGT TCAAGACCAG 240 CCTGGATAGC ATAGCAAGAC CTCATCTGTT TAAAAAAAAA AAATTTGCTT GAGTGCCGGC 300 AAATACCTGT GGTCCCAGCT ACTTGGGAGG CTGAGGATCA TTTGAGCTCA GGAGGTCAAG 360 GCTGCAGTGA GCTGTGATGT TGCCACTACA CTCCAACCTG GGCAACAGAG CAAGACCCTG 420 TCTCAGAAAA AAAAAAAAAA AAATCAACTT CCTCCATCTC ATAGCCCCAC TGCCTGTGAC 480 TCTCTCGACT TTGACCTTCT TGCTCTGTGC TCATTCCCTA CTGTCCCTTC CTTCTAGAGC 540 AGGAAGAAAA TCTCATTTGA AAAGCCCAGA ACTATTCTGT TACACAGAAG ACCAGGAAAG 600 AGAAGTTTAA AACCAAGTCT AAGAAAAGTC CCCAGGGTCA CACAGTTCAT AAGCGACAGA 660 GCCAGGATTC CAGCACCTGG TCTGAATGAC CCAGAAGCCA GGACTTTTCC CCCGCACCTC 720 TACATCAGGC GTGCTGGAGC AGGAAGCGGT CAGGCAGCCC CACTAGGAGT AACAAAGATG 780 GGATCACAGA GCCTTGGAAC TGGGGGTGGC TCCTTCATGA GACCATGGTG CCACCTACTG 840 GCAGAAAGAG AAGGGGTGTA CACAGAGCGC TAAGAGAAGA CTGGGAAGGA GAAAAAGAAA 900 AAGATGGGGA AGGAGAGGAG ATGGAAAGAT GAAGGGAGGG GAAAAATGGG GAATGTGAGG 960 TTTCATGGAG GGAAGAGGAT TAGGAACTAT TTGCTACTCG CAGGAGAGAG CGGAAGCTGC 1020 CAAATCTCAG TCATTTCCTT GAAAGTGAGT GAGAGACAGA GAAAGAGAAA GAGGGAGTGT 1080 GTGTGTGTGT GTGTGTGTGT TTGTGTGTGT GTGTGAGTGA AAGAGATACT TAAGTACGTA 1140 CATCAGATAT TATTCTGTTG TTTGTTAGTT GCTGGGAGTC AGTCCACAAA GAATTTAGTG 1200 TGCGTGTGTG CGCACGGACG CACACACACA CATGCATTCA GGAACACTAG CACATGTTTA 1260 TGTATGTAAC TGGGTGCTTG CTGTATGAAC ATATGGATGG CAGCATGAGC AGATGCATGT 1320 GCATGTGAGC ATGAGCACAG AGGGTATGTA TGAGTGTATC AGCAGATGCA GGGTAAGAAG 1380 CACATTACAC TGTTGTGGTG GAGGGCACGC AGACATTCTG GGAAGCCACT TGCCCCACCC 1440 CTGGGCTGCT TCTTCTTGAG ATCAGGAGGG GCGTTGCCCA GGGCTGGTGT TGCCAGGTGG 1500 AGGCCTGCTG AGGCAGTGGT TGTGGGGATC GGTCTCCAGG CAGCAGGGGG CAGCAGGGTC 1560 AAGGAGAGGC TAACTGGCCA CGGGTGGGGC CAGCAGGCGG GCAGAAGGAG GCTTTAAAGC 1620 GCCTACCCTG 1630
|