EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS048-01016

Organism

Homo sapiens

Tissue/cell

Fetal_small_intestine

Coordinate

chr1:38344600-38345750

Target genes

Number: 14
Name	Ensembl ID

C1orf109	ENSG00000116922
CDCA8	ENSG00000134690
EPHA10	ENSG00000183317
RP11	ENSG00000214141
MANEAL	ENSG00000185090
C1orf122	ENSG00000197982
YRDC	ENSG00000196449
MTF1	ENSG00000188786
SNORA63	ENSG00000252448
INPP5B	ENSG00000204084
SF3A3	ENSG00000183431
U6	ENSG00000212541
FHL3	ENSG00000183386
UTP11L	ENSG00000183520

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:38345430-38345442	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:38345434-38345446	AAACAAACAAAC	-	6.32
Nr2f6(var.2)	MA0728.1	chr1:38345223-38345238	GAGGTCAGGAGTTCA	+	6.22
Nr2f6(var.2)	MA0728.1	chr1:38344711-38344726	GAGGTCAGGAGGTCA	+	7.19
Nr2f6(var.2)	MA0728.1	chr1:38344719-38344734	GAGGTCATGAGGTCA	+	7.34
RARA	MA0729.1	chr1:38344719-38344737	GAGGTCATGAGGTCAAGA	+	6.72

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I037877

chr1

38342909

38346557

Enhancer Sequence

CGTGAGCCAC CGCACCCAGC CTATGGTCTT TAAAAGATCT TGGTTAAGGC CAGGCACGGT 60
GGCTCACGCC TGTAATCCCA GCACTTTGGG AGGCCAAGGC AGGGGGATCA TGAGGTCAGG 120
AGGTCATGAG GTCAAGAGAT TGAGACCATC CTGGCCAACA TGGTGAAACC CCGTCTCTAC 180
TAAAAATACA AAAATTAGCT GGGCATGGTG GTGTGTGCCT GTAGTCCCAG CTACTCGGGA 240
GGCTGAGGCA GGAGAATTGC TTGAACCCGG GAGGCAGAGG TTGCAGTGAG CCGAGATTGT 300
GCCACTGCAC TACAGCCTGG CGACAGAGTG AGACTCCGTC TCAAAAAAAA AAAAAGATGC 360
TAGTTAAGAG AACAGCCTCT GAATTCCCAC TGCCTGGGTT CAAATCCTAC CTGTACCCCT 420
TGTCTGCTTG GGGGCCTCTT TAATTTTTCT ATGCTTCAGT TTCCAATCTC ATAAAATGAG 480
GTTAATAAAT CATACCTACT TCAACAGGTT CTTGAGGATT AAATGAGAAA ATAACAAGGG 540
CATCAAATAG TACATGGCAC ATGGTAAGCA CTAATAAAAA TATTAACTAC TGACTTTGGG 600
AGGCTGAGGC AGGCGGATCA CTTGAGGTCA GGAGTTCAAG ACCAGCTTGG CCAACATGGT 660
GAAACCCTGT CTCTACAAAA TTAGCTGGGC CTGGTGGCAC ATGCCTGTAA TCCTAGCTAC 720
TTGGGAGGAT GAGGCAGGAG AATCGCTTGA ACTCGGGAGG CAGGGGTTGC AGTGGGCCAA 780
GATCCAGCCA TTGTACCCTA GCCTGGATGA CAGAGCAAGA CTCTGTCTCA AAACAAACAA 840
ACAAACAAAA ATATTAACTA CTGTGTAATG TCCAAGTACC AGCTAAGTTA GTTGGAATCA 900
TCTCATCCTA GGCACAGCTA AAAAGTAAAC CAGTATTAAA ATTATGGAAC AAAGGCTAAG 960
GCAGTCACAA AGTTAATACA TGGGAAAGAA GCCTGCTTCA TGAGCAGATA CTGAGAGAAA 1020
ATGTTTGATC AGAGTGCAAA ACATAGGGAA AAAGTCACAG GAAGCATATA TTCTTCCTTA 1080
GGTCCAAAAG GGCAAGTACT TCCCAGAATT TCTGGGTTTC CGTTTGCTCA ACCCTTTGAA 1140
GCAACCTCTG 1150