EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS047-28790

Organism

Homo sapiens

Tissue/cell

Fetal_placenta

Coordinate

chr6:31697000-31697820

Target genes

Number: 27
Name	Ensembl ID

AIF1	ENSG00000204472
PRRC2A	ENSG00000204469
BAG6	ENSG00000204463
C6orf47	ENSG00000227198
XXbac	ENSG00000263020
LY6G5B	ENSG00000240053
ABHD16A	ENSG00000204427
LY6G6F	ENSG00000204424
LY6G6E	ENSG00000204422
LY6G6D	ENSG00000244355
C6orf25	ENSG00000204420
LY6G6C	ENSG00000204421
DDAH2	ENSG00000213722
CLIC1	ENSG00000213719
MSH5	ENSG00000204410
VARS	ENSG00000204394
LSM2	ENSG00000204392
HSPA1A	ENSG00000204389
HSPA1L	ENSG00000204390
HSPA1B	ENSG00000204388
C6orf48	ENSG00000204387
SLC44A4	ENSG00000204385
EHMT2	ENSG00000204371
ZBTB12	ENSG00000204366
CFB	ENSG00000243649
SKIV2L	ENSG00000204351
C4B	ENSG00000224389

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs707916

chr6

31697558

hg19

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF13	MA0657.1	chr6:31697628-31697646	TAACAGGGGGCGTGGTTC	-	6.33
KLF16	MA0741.1	chr6:31697329-31697340	GCCCCGCCCCC	+	6.02
KLF16	MA0741.1	chr6:31697633-31697644	GGGGGCGTGGT	-	6.14
KLF5	MA0599.1	chr6:31697329-31697339	GCCCCGCCCC	+	6.02
SCRT1	MA0743.1	chr6:31697233-31697248	AAACACCTGTTGCCC	-	6.6
SP2	MA0516.2	chr6:31697325-31697342	AGCAGCCCCGCCCCCTT	+	6.75
SP3	MA0746.2	chr6:31697632-31697645	AGGGGGCGTGGTT	-	6.09
SP4	MA0685.1	chr6:31697326-31697343	GCAGCCCCGCCCCCTTA	+	6.35
SP8	MA0747.1	chr6:31697632-31697644	AGGGGGCGTGGT	-	6.52

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_00658	chr6:31693438-31708648	Adipose_Nuclei
SE_11688	chr6:31693118-31709121	CD20
SE_42704	chr6:31694582-31698975	Lung

Enhancer Sequence

GTCTGGGAGA AGAAACAGAA AAGGAGGAGA CAGAGAAAAA GACATGCAGA CAAGGGCGTT 60
GGGGGTGGTT AAGAGCGCCC AGGTCTTCCT CCTGCCATCT CTAGGCGTCC CTCCCACTCC 120
GCCCCACCCA CTCCAGACCT TCCGCTCCTG TCGACCTCAC TCTACCCAGC ACCCTCAGGG 180
GTCAGATTCT TTAAGAGGAG CCTGAGGAAC AAGGCTAGGG TCTCTAATCT CCAAAACACC 240
TGTTGCCCCT GCTTGGGGGC TTGTGAGGTC CCTGTCGGGC GCCCCTCTTG GCAGCCACTA 300
GGATGCGCTC ACTCCCCAAA AATGCAGCAG CCCCGCCCCC TTAACCCTCA GCTGCTCGCT 360
ACCGCAGGGA CTGGAAGTCC AGCCCGCGAC CCGCAGGGGT TATGGGACAG AAGGAGAAAG 420
CTGGAGAGGC AGGGGCTGGG GAATGGAAGT CCTGAATACC CGAACGAGAA GGGAGAGAGG 480
TGGGTAGGAA GGGAGGAGTT CGAGCCTAAG GAGTTAAGCA TCCTCTCTCC GCCCTGGCTG 540
GTCACGCTGC CCCTAGCGCG ACCTAGTATA AACCAGACCG AGTCCCGAAG GACTGGGAGA 600
GGTCTAAAAC GAAATGCGAG GGGCGGGGTA ACAGGGGGCG TGGTTCCGGG GCGCTGGCAC 660
TACTCCCGGC TCCAGGACCC GGTTCCCCGT CTATGTCCCA AAGTCCACCC CGCCTAGCTC 720
CGCGCCCAAA TACCGGCTCC CCATACTCTC TGTCTGGTGC AGGCATGGGC CCGGCACCCC 780
CAAACTCCGG CCCCCACACG GTTCAGGGCC CCCCACGCAA 820