EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS047-24285

Organism

Homo sapiens

Tissue/cell

Fetal_placenta

Coordinate

chr3:112365960-112367050

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1

MA0050.2

chr3:112366601-112366622

TTTTACTTTTTTTTTTTTTTT

6.16

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_00406	chr3:112364149-112367519	Adipose_Nuclei
SE_02361	chr3:112365206-112367169	Astrocytes
SE_37138	chr3:112363960-112375700	HSMMtube
SE_39049	chr3:112364885-112367269	IMR90
SE_45078	chr3:112365216-112366402	NHLF
SE_45587	chr3:112364555-112375528	Osteoblasts
SE_51753	chr3:112364867-112375299	Skeletal_Muscle_Myoblast
SE_55789	chr3:112364270-112375298	u87
SE_63543	chr3:112364867-112375302	HSMM
SE_67743	chr3:112364270-112375298	u87

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I112646

chr3

112364974

112375510

Enhancer Sequence

ACCCTTATCC AAAGAAAAGG ATTTTAAGTG AGAATGGAAA GCAAGTCACT CAAGTATTGG 60
GGGAGGGGAA GAACATTCAG AGTAGAGGGA ATGGTGAGTG CACAGGCACT GACACCCGGG 120
CTATTTCACA AGCTTGTTCC AGAAGAGCAA TGTTGGCCGA TTTTAAGCAA GGATGTGGCA 180
AAGCTTGATA TGTGACTTAA CAGGAATGCT AGGAATGCTG CCTGGAGAAT AGAGTGTGGC 240
TGCAAGAATG ACAACAGTTA ACCAACTGGT GAGGAAGATA ATGTAGTGGT ACAAGTGAAA 300
GGTGCAGTCT ATTGAACCAG CGTGCTAGAA GCACGGTAAG TGCAGAAAAG TCACTCGATG 360
TGGTATATAT TTTGAAAACA GAGCTGACAG AAGCAGTTTG GGGCAGAAAG AATCAAATGT 420
TTTGTTTGAA ATTCCCATCA GACACTCTGA TACAGATGTC AAGCAAGCAG TTAGATACAT 480
GAGTCTGGAC TTCGAGGAGG ACTGAGGCTG GAATTATAAA TTCGAGAGGC TATTTAAAGC 540
AAGCTTGCCC AACCCGTGGC CCATGGGCTG CATGCAGCCC AGGGTGGCTT TCAATGTAGC 600
CCAACACAAT TTGTAAACTT TCTTAAAACA TAGAGATTTT TTTTTACTTT TTTTTTTTTT 660
TTTTTAGCTT ATCAGCTATC GTTAGTGTAT TTTATATGTA GCCCAAGACA ATTCCTCTTC 720
TTCCAGTGTG GCCCAGAGAA GCCAAAAGAT TGGACACCCC TGATTTAAAG CCTAAGGCTA 780
GAAGAAATTA CTTAGGGACT GGTAGAGGAA GAAAAAGAGT AAAGGACATG AAAGAGGAAC 840
AGCTAGTGTG ATGGGGGAAA GGCAGGAGCA CGCAGTGTTT TCAGTAGCCG GCAGCTGGGA 900
CCATGTTACT TCTTTGGCCG TTTCTCCACA GGTCCTTGCT ACATGTGTCC AGATTCAGCT 960
TATTCATCAG TGTCCAGGCC CTGCATCACC TCCTCCACAG GGTTTCCCGA TGCTCCAACC 1020
CAGATGGCTC TCTCTTCTCT GAGAAGCAAT TCTGTAGAGC ATCACTCCTC TGATCTTTTT 1080
GTACTTCACG 1090