Tag | Content |
---|
EnhancerAtlas ID | HS047-21452 |
Organism | Homo sapiens |
Tissue/cell | Fetal_placenta |
Coordinate | chr20:47344880-47345630 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr20:47345337-47345358 | TTGTGGTTTCACTTTATTTTC | + | 6.07 |
|
| Number of super-enhancer constituents: 14 | ID | Coordinate | Tissue/cell |
SE_01671 | chr20:47343927-47345354 | Aorta | SE_03141 | chr20:47336078-47345735 | Brain_Angular_Gyrus | SE_03860 | chr20:47335137-47350514 | Brain_Anterior_Caudate | SE_04767 | chr20:47330290-47357597 | Brain_Cingulate_Gyrus | SE_05768 | chr20:47330773-47357344 | Brain_Hippocampus_Middle | SE_06681 | chr20:47321409-47357433 | Brain_Hippocampus_Middle_150 | SE_07719 | chr20:47329977-47357562 | Brain_Inferior_Temporal_Lobe | SE_08847 | chr20:47344206-47345061 | Brain_Mid_Frontal_Lobe | SE_08847 | chr20:47345299-47345667 | Brain_Mid_Frontal_Lobe | SE_09151 | chr20:47344028-47345465 | CD14 | SE_11697 | chr20:47343801-47347795 | CD20 | SE_20065 | chr20:47344072-47345619 | CD56 | SE_22493 | chr20:47344181-47345526 | CD8_primiary | SE_33505 | chr20:47344134-47350438 | H2171 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I048728 | chr20 | 47344672 | 47345750 |
|
Enhancer Sequence | ATAAGCATGG ACCACTGTCC CCTACCACAC ATGGGGAAAT CGTGGCACGA AGAGCTGGCC 60 CAAGTCTCAG AGCTACTTCC ACTGCCTCTT AGGGATCACA ATAAGCTCTG CCTGGAAAAG 120 CAGAATTCTG GGGACCCCAG GTCCCAGCTC TAGCTGAGCT GAATGGCCCC CACCAGTGTT 180 TACCCCTGGC ACAGATGGGG GATTGAGGCT GCGGCAGCTG GGAGATGCCG GGCCCCACGC 240 TGCTCACACT CAGGCCTTTG TCCTAGGAGC CAGCACTTGC CACAGGCTGC CCTGGTGATG 300 TCAGCTCTGG GCAGAGTGCA GGGCGCCTGG GGGTGGGGAA GTGCTTTCTA GAAGCCCCCA 360 GGGCTTGGCG TGAGAAGGGC CCATCTTTGT CCAGGATCAA GGAGTTTTCA CAAGATTTTC 420 ACAGCCACCA AGGACACTTC CCCACAAACA CTCTAGATTG TGGTTTCACT TTATTTTCTT 480 TTAAAAAAAA ACAAAAACAA AAAAAACAGG CAAACACACA CAGAGCTAGC ATTCACTATT 540 CTCACTACAT TTCAGGCACT ATGGGAAGAA CTTCTGAGAA GTCCTTAAAT GCTCAAAATT 600 CACAGAAGTG AGTTAGATGA GGCGTCAACC TCATGGTCTT CCCAACCTCC TAATGGCAGC 660 ACGTTCCTGG ACTATCCTGA GTCCTCCCTT TCTGCCCATG CTGCCCCCCT GGCTGATCCC 720 ACCCTGACTC GGCTTTTTTT TCTTTTTTTT 750
|