Tag | Content |
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EnhancerAtlas ID | HS047-16433 |
Organism | Homo sapiens |
Tissue/cell | Fetal_placenta |
Coordinate | chr19:2490580-2492300 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr19:2491952-2491973 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 | IRF1 | MA0050.2 | chr19:2492274-2492295 | TCTTTCTTTCTTTTTTTTTTT | + | 6.25 |
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| Number of super-enhancer constituents: 12 | ID | Coordinate | Tissue/cell |
SE_24383 | chr19:2490669-2491268 | Colon_Crypt_2 | SE_24383 | chr19:2491287-2491968 | Colon_Crypt_2 | SE_25170 | chr19:2490646-2491955 | Colon_Crypt_3 | SE_27369 | chr19:2490633-2492097 | Esophagus | SE_31940 | chr19:2490678-2492023 | Gastric | SE_37152 | chr19:2490278-2499382 | HSMMtube | SE_41828 | chr19:2490655-2491964 | LNCaP | SE_43297 | chr19:2490649-2491929 | Lung | SE_44558 | chr19:2490659-2492087 | NHDF-Ad | SE_48020 | chr19:2490938-2491828 | Pancreas | SE_50943 | chr19:2490599-2491991 | Sigmoid_Colon | SE_54295 | chr19:2490687-2492105 | Spleen |
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| Number: 1 | ID | Chromosome | Start | End |
GH19I002490 | chr19 | 2490659 | 2497696 |
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Enhancer Sequence | AGGCACCTGC CACCACGCCC GGCTAATTTT TGTATTTTTA ATAGAGACGG CATTTCACCA 60 TGTTGGCCAG GCTGGTCTCG AACTCCTGAC CTCAGGTGAT CTGCCTGTCT CAGCCTCCCA 120 AACTGCTGGG ATTACAGGCA TGTGAGCCAT GGTGCCCGGC ACAAACAGCC TTGTCCATGC 180 AAGCACAAGC ACCCACATGT GTCTAAGACC CTGGTGTGCA CACCTGCACT CTGACCTGCA 240 CTGCGTGTTC CCACTAGGGA AATGCAAATA TTTCTAAGCT CCAATGCTCA CTCCACAGAG 300 CCCCGAGGCC TGTGAATACC CGCGGTATAC AGAGATCCAT GAGGTGCCAG TACTCAAACT 360 GTGGAAGCCT GCACGTGCTG ATTTGGGGTG GGAGTAGAGT GCAGGGAACT CATCTGTGTG 420 CAGCCCCTTT CTCTGGGCCC TTTGTGTGCA CCTCAGTTTA CCCCACCTGG GTAAGAGACT 480 CTGCCCTGCT GGAGTCTCTT CTGGTTCTGA CTTTGAAGGG CTCCAAGGTG TGGGGGGAAA 540 GGGGGCTGCA TTCCCTCTCT GCTGTGTGCC TCTGGGTGGT GGATTCAGGC TAGCAGGGCT 600 GGGGGCTGGG CCTCCAGGCC CTTCCCGGAA GCCCGGGAAG CAGGTGCAAG GGTAGGCAGT 660 CTCCACGGGC AGGGCGCCAG ACCTTGGCTT CCCTGAAACT GGGCACAGCA GCTGGGAGAG 720 GTTTCCGGGC CCGCCTGGCC CCACCTGGCC CCTGGCACTT TCGGAAGATG GGCGGGGCAG 780 GCAGGCAATG CCAAGGACGG GCGAGGCCCA GCCTGCACAA GAGTCGCCGG TGAACCTGTG 840 CGCACACACG GGTGTGCATG TATATGTGTG CACACGTGCA TGGGCCATGC TGATGTGAGT 900 TCTGTACCCC ACCTACAAAC GGGTGTGCTC ATGAACACGT GCAGGGTCAC CCTGGCACAT 960 GAACCGTGCA GCACAGGCAA TGGCCCAGCG GTAATTCACC CATAGCGGTG ACAGGAAAGA 1020 GATGCTTGTC TGCTTTGCTC ACTGTGCGTC TCCAGCACCC CACAGCTGGT TGGCACTTGG 1080 TGAATATTTG CTGAGTGGAC AAATGAGTGA ATACACGAAC ACATCATTTT GCAAATATGT 1140 ACTGAATGTC TCTACTCTGC ATACCAGACA TTTGCACATC TTCAAACAAC AAAAAGATCC 1200 TGGGAAACGA CATTCTAGAC ATCCACGGGG TGGGAATAAG CCCACGCCTG AGAGTACACA 1260 CTCATGTCCA GGAAACACCT GAGTCCACTT TGATTTGTTC ACCTCCAGAA GCCAGAGCCT 1320 GGTGCCCACA CACAGGCCCT CATGCAGAGA CACGCATTTT CTTTCTTTTT TTTCTTTCTT 1380 TCTTTTTTTT TTTGAGATGG AGTTTTGCTC AGTTGCCCGG GCTGGAGTGC AGTGGCGCGA 1440 TCTCGGCCCA CTGCAAGCTC CGCCTCCCGG GCTCACGCCA CTCTCCTGCC TCAGCCTCCC 1500 GAGTAGCTGG GACTACAGGC GCCTGCCACC ACGCCTGGCT AATTTTTCAT ATTTTTTTAG 1560 TAGAGACGGG GTTTCACCTT GTTAGCCAGG ATGGTCTCGA TCTCCTGACC TTGTGATCTG 1620 CCCACCTCGG TCTCCCAAAG TGCTGGGATT ACAGGCGTGA GCCACTGCGC CCGGCCGCAT 1680 TTTATTTTTT CTTTTCTTTC TTTCTTTTTT TTTTTTGAGA 1720
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