EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS047-15593 
Organism
Homo sapiens 
Tissue/cell
Fetal_placenta 
Coordinate
chr18:3594480-3596570 
Target genes
Number: 3             
NameEnsembl ID
TF binding sites/motifs
Number: 9             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
HLTFMA0109.1chr18:3596028-3596038ATATAAGGTT-6.02
NFAT5MA0606.1chr18:3594836-3594846ATTTTCCATT+6.02
NFATC1MA0624.1chr18:3594836-3594846ATTTTCCATT+6.02
NFATC3MA0625.1chr18:3594836-3594846ATTTTCCATT+6.02
NFE2L1MA0089.2chr18:3595856-3595871ACTGCTGAGTCAGAC-6.13
Nr2f6(var.2)MA0728.1chr18:3596376-3596391TGAACTCCTGACCTT-6.04
SNAI2MA0745.2chr18:3595754-3595764AACAGGTGCA+6.02
SPI1MA0080.4chr18:3595502-3595516AAAAAAAGGAAGTA+6.3
SPICMA0687.1chr18:3595502-3595516AAAAAAAGGAAGTA+6.79
Number of super-enhancer constituents: 60             
IDCoordinateTissue/cell
SE_00681chr18:3592507-3598283Adipose_Nuclei
SE_01246chr18:3592967-3598215Adrenal_Gland
SE_02214chr18:3591727-3598156Aorta
SE_02332chr18:3592817-3597025Astrocytes
SE_03805chr18:3592923-3596231Brain_Angular_Gyrus
SE_03805chr18:3596353-3597783Brain_Angular_Gyrus
SE_04559chr18:3592856-3598215Brain_Anterior_Caudate
SE_07530chr18:3591879-3598312Brain_Hippocampus_Middle_150
SE_09704chr18:3592929-3598073CD14
SE_12137chr18:3592836-3597394CD3
SE_12553chr18:3595991-3596208CD34_adult
SE_13306chr18:3596051-3597674CD34_Primary_RO01480
SE_13339chr18:3592588-3598438CD34_Primary_RO01536
SE_14380chr18:3591889-3599799CD4_Memory_Primary_7pool
SE_15631chr18:3592946-3597686CD4_Memory_Primary_8pool
SE_16575chr18:3592708-3597376CD4_Naive_Primary_8pool
SE_18490chr18:3591601-3598245CD4p_CD25-_Il17-_PMAstim_Th
SE_19351chr18:3592786-3598211CD4p_CD25-_Il17p_PMAstim_Th17
SE_20364chr18:3592674-3597779CD56
SE_20735chr18:3592453-3598703CD8_Memory_7pool
SE_22740chr18:3591822-3598075CD8_primiary
SE_23414chr18:3592922-3597864Colon_Crypt_1
SE_24111chr18:3592925-3596368Colon_Crypt_2
SE_25677chr18:3592616-3598121DND41
SE_25874chr18:3591758-3598297Duodenum_Smooth_Muscle
SE_27083chr18:3591985-3597986Esophagus
SE_28047chr18:3592655-3597867Fetal_Intestine
SE_29024chr18:3592648-3598038Fetal_Intestine_Large
SE_29644chr18:3592063-3598202Fetal_Muscle
SE_31815chr18:3592870-3598110Gastric
SE_33785chr18:3592848-3597853HCC1954
SE_34235chr18:3591761-3600638HCT-116
SE_34627chr18:3591101-3598422HeLa
SE_35926chr18:3592649-3597346HMEC
SE_37030chr18:3591431-3598356HSMMtube
SE_38007chr18:3592233-3598184HUVEC
SE_38955chr18:3592928-3597938IMR90
SE_39841chr18:3592913-3599794K562
SE_41213chr18:3592804-3598284Left_Ventricle
SE_42503chr18:3591992-3598201Lung
SE_44173chr18:3592634-3597763NHDF-Ad
SE_44760chr18:3592624-3597854NHLF
SE_45732chr18:3592590-3597944Osteoblasts
SE_47120chr18:3589160-3600707Panc1
SE_49305chr18:3592929-3598121Right_Atrium
SE_50254chr18:3592937-3598180Sigmoid_Colon
SE_51807chr18:3592918-3597978Skeletal_Muscle_Myoblast
SE_52452chr18:3591829-3598173Small_Intestine
SE_53497chr18:3591848-3598380Spleen
SE_55514chr18:3592948-3597447Thymus
SE_55892chr18:3592660-3598044u87
SE_56746chr18:3592965-3597996VACO_400
SE_57446chr18:3594392-3595856VACO_503
SE_57446chr18:3595863-3596333VACO_503
SE_59076chr18:3583132-3606872Ly3
SE_62648chr18:3583709-3607033Tonsil
SE_63593chr18:3592918-3598004HSMM
SE_64235chr18:3592597-3597120NHEK
SE_67547chr18:3592660-3598044u87
SE_68903chr18:3593737-3595512H9
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 1             
ChromosomeStartEnd
chr1835947333596177
Enhancer Sequence
AGGTAAGTCG CTCTTTGGAA GGGGTGGAGG TCTTTGCTGG ACTTGTCTTC CGAAAAGTAT 60
GAAGAGTGGA AGTCAAGGCT CAGAATGGCG TCCTTTTTTA CCTTATCACC TTAACAAAAA 120
CTTCACCTTA GCTGCAGGGT TAAACCTCTG GGTTGGGGCT GGGGATTTTC GTTGTTGTTG 180
TTTTAAAGCA GCAGCCAAGG CCATGTTTTT TAAGGTGGTG AGTTAAACGG AGCAAGAGCT 240
GCGGTAGCCT TTTCCACCCA ATCTCTTTCT TCACATCCTA GTCACAGCCA AGGGTAGGGT 300
GGATGGCAGT GAGGATAAAC AGCCCAGAAA CAGGATTCCT GCAGGGTGGG ACTGGCATTT 360
TCCATTTTTA TCTGAAGTTG TACTTTGAAT GCAGACACCT TTCTCTCAGG CCAGAAGCAC 420
TGCTCATTTG TATTGCTGGC TTCCAGTTAG CCTATTTGCA AGGATTACTT AGGATTTCCA 480
GACTGCAGGC CCAGCTACCC AGAGAGTGTG CCTCAAAGCC CCACCTCAAA GCTTTTATCT 540
CTATGTGGCG GGAAACACCC ACGAAAATGC CAACGGCGGT ATTTGTAACT TGCCTTCTTC 600
CTTTTGGGAA CTGCTTTCTG CAGCTCTCTC TGCGTTAGAG GAATAGCTAC AGCTGGGAGC 660
TGCTCCAGCC ACGCAGGAGG AGAGGGCACC CATTGAGAGG CGGGCACCCC TTCTGTCTCC 720
CTCTGGCTAT GTTAACTGGA AACTAGGAAA GGGGTTCAGA TCAAAGTAAC TGCTGTCTTC 780
AGAAAGTTCC ATTCATTAAC TAAGTTAGCG GAAATTAAAT GGTGTTTGGA GGAAGGTCAT 840
TTCAGAAGGC CCAGGGCCAG AGGCTGAGGT CTAAAACTTC TAATCTGGAC TTCTATTGAA 900
GTTTGGCAGT AAGTTAAACA GGAAGTTGAA GGCTACCATA TGTAAATCCA GTTGTTGCCT 960
GAAATCAGTC ATTTCAAGGG AGTATCTTGA AAGGACACAG ACTGGGAAAC AGGCATGAGA 1020
AAAAAAAAAG GAAGTAGACA GACATTTGGC TAGTATGTGC CTGGACCACT TAACACTAAA 1080
GATTAGAAAC CTAGGGCTCT GAGTAAGAAT CATTTGACCA GTAGCTAAAG TGAGTCATGG 1140
CCTGCACAGA ACTAGGGCAC ACATGTTGAA GTCAGGATGT TGAGAACATC AGGCTTACTA 1200
ATTTGCAAGG CAGGAGTGCT GCTTCCAGTA GGGAATGTGA TCAGGATTTC ACGGCTCATT 1260
TTCCCAGCCT TTCCAACAGG TGCAATCAAG TCATCCGTGT ACACAAGTGA CTGCCCTGTT 1320
ACATCTGTTA GGATTAAATT TCCATTTGTT CCATTACTTT ATATGAAGTG ATTTCTACTG 1380
CTGAGTCAGA CAGAACACTT CCTCTTAGAC CTAGGGACTT TTTTCAACAT TTTTAACAAT 1440
GTGTGTGTTT TTCAAAATGT GTCCCAACCA GGTCTGCAGG TCTTCCTGGG TTGAATGGAC 1500
TGTTTACAGA AGGGGAAGAT TCAGGCCCAA GGTCAGGGTT ACAGAATTAT ATAAGGTTTC 1560
CTGTTTGGGC AGCTGGTCTA GCAACACCTC TGGTTGGGGC AGACTGGGTC TTGTTGAGAG 1620
ATAGCATGCC CAGGAGGCTA GGGCAGGGAG AGTGCCAGGA GCAGGAAAGA ACATTTTTCT 1680
TTTCTTTTTT TTTTTAAGAC CGTGTCTTAC TCTGTCACCC AGGCTGGGGT GCAGTGGTGC 1740
GATCTCGGCT CACTGCAACC TCCGCCTCCC AGGTTCAAAC GATTCTCCTG CCTCAGCCTC 1800
TCGTGTAGCT GGAATTACAG CCGCCCGCCA CCATGCTTAG CTTATTTTTA TATTTTTAAT 1860
AGAGACGGGG TTTCACCATG TGGGCCAGGC TGATCTTGAA CTCCTGACCT TAGATGATCT 1920
GTCTGCCTCG GCCTCCCAAA GTGCTGGGAT TACAGGCTTG AACCACCAAG CCCGGCCTGA 1980
CATTTTTCTT TTAAATCTTT TATCAACCAG CTTTCATTTC TTGTCAGATG TCACTTTTCA 2040
GCAACCTGTT GCTATATTCT CTGTTAGGAG AACTTTTTTT TTTTTTTTCT 2090