Tag | Content |
---|
EnhancerAtlas ID | HS047-15018 |
Organism | Homo sapiens |
Tissue/cell | Fetal_placenta |
Coordinate | chr17:62783430-62784410 |
Target genes | |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
Lhx3 | MA0135.1 | chr17:62783736-62783749 | TAATTAATTAATT | + | 6.78 | Lhx3 | MA0135.1 | chr17:62783737-62783750 | AATTAATTAATTA | - | 6.78 | Lhx3 | MA0135.1 | chr17:62783740-62783753 | TAATTAATTAATC | + | 7.34 | POU6F1 | MA0628.1 | chr17:62783738-62783748 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr17:62783742-62783752 | ATTAATTAAT | + | 6.02 | POU6F1 | MA0628.1 | chr17:62783738-62783748 | ATTAATTAAT | - | 6.02 | POU6F1 | MA0628.1 | chr17:62783742-62783752 | ATTAATTAAT | - | 6.02 | Znf423 | MA0116.1 | chr17:62783641-62783656 | TGAACCTTGGGTTCC | - | 6.01 |
|
| Number of super-enhancer constituents: 7 | ID | Coordinate | Tissue/cell |
SE_23316 | chr17:62782146-62784786 | Colon_Crypt_1 | SE_23804 | chr17:62782149-62783722 | Colon_Crypt_2 | SE_23804 | chr17:62783741-62784256 | Colon_Crypt_2 | SE_25122 | chr17:62783138-62785003 | Colon_Crypt_3 | SE_26587 | chr17:62781896-62785474 | Esophagus | SE_33864 | chr17:62782877-62784292 | HCC1954 | SE_50533 | chr17:62782011-62785410 | Sigmoid_Colon |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I064786 | chr17 | 62782121 | 62785186 |
|
Enhancer Sequence | TTCAAACAAA ACACAAGCGA TTCTTTAGAA AAGTTTCGAA GACCCAGGCC AGCCCGTGTT 60 GTTTATTTTC ATTCCCCTGG CGCTGCTCAC CAGGCAGACA CCTCCCGCCT GGGCGGGGCA 120 GGGCCTAGGA GCACAATTCA GCCTGCTTGG GACCCGGTCT TCAAGGTAAC TAACTAGCTG 180 GTTGGACCTT GGACATGTTA CTTAAGCTCT CTGAACCTTG GGTTCCCCTC TCTGGGAAAT 240 GGAGTTGTCT GGATTGAGTA ACTTATTGAA AGCATTTGGC TTGGTGCAGA GCTCACAGTA 300 AACATGTAAT TAATTAATTA ATCATGAGGA GGATAGGTGC TGACATCTGG GACCAGGAAC 360 TGGGCTAAGA GCTTCATACG CACTCATTCA TTTGATCCTC ACAATAATCC TGTGAGGCTG 420 GTACTAACAC AACCCCAACT TTGAGAAGAG GAAACAGAGA GGTTAAGTCA CTTGCCTGAG 480 GTCACATATC TAGTAGGTGG GAGAGCTGGA GTTTGAACAC AGGGGCCTGG CTCCTGAGCC 540 TGCACCCTTG TCCACCTGGT AAATGCCTAG AGATGCAGGC TGTTGTCATT ATTGCCAAAG 600 TCACATACCA GGGACAGTGC TGGGGACAGT AATGCACAGG ATATGGCCTC TGCCCTCCTG 660 TGGCCCCTGG TTTGGCCGAG GGACAGACAT CCAAGTGTCT GGTTTCAGTG CTACATGAGA 720 GCAACCGAGA CGTGTCCTAA GTACAGCAGT CCCATTTCAG AGGTGGCGGG GGGAGCAGAG 780 GACAAGGGCT CAGCTGCCAA CGCGGCTCTA GTTTCCACCA CACCAACGGC AGGGATCCAG 840 CGGGCCCCAT CCAGAGAGAT GGAGAGGAAA CACTTGCAGA AAGTCCCCTG GTACAAAACC 900 TGCCTGGCCT GGCTGTGTGT GTTTACATGG GTACTGGGGG TGGGAGGTTA CTCCAAGTCA 960 GAGGATGCTT GGGAACCTGC 980
|