Tag | Content |
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EnhancerAtlas ID | HS047-14813 |
Organism | Homo sapiens |
Tissue/cell | Fetal_placenta |
Coordinate | chr17:49030710-49032530 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr17:49031054-49031075 | AAAAAAAAAAAGAAAGAAAGA | - | 6.25 | Myod1 | MA0499.1 | chr17:49031795-49031808 | TGCAGCTGTTCCT | + | 7.34 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | + | 6.37 | TP53 | MA0106.3 | chr17:49031781-49031799 | GACAAGCCCAGACATGCA | - | 6.54 |
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| Number of super-enhancer constituents: 19 | ID | Coordinate | Tissue/cell |
SE_00952 | chr17:49030867-49035094 | Adrenal_Gland | SE_04178 | chr17:49031015-49032189 | Brain_Anterior_Caudate | SE_05235 | chr17:49030956-49032312 | Brain_Cingulate_Gyrus | SE_06067 | chr17:49030165-49035186 | Brain_Hippocampus_Middle | SE_23191 | chr17:49031126-49031896 | Colon_Crypt_1 | SE_23784 | chr17:49031665-49031984 | Colon_Crypt_2 | SE_26011 | chr17:49032143-49033783 | Duodenum_Smooth_Muscle | SE_26691 | chr17:49030919-49033447 | Esophagus | SE_29967 | chr17:49030933-49033704 | Fetal_Muscle | SE_37666 | chr17:49025326-49036503 | HSMMtube | SE_47468 | chr17:49031102-49031460 | Pancreas | SE_48151 | chr17:49023159-49034340 | Psoas_Muscle | SE_49193 | chr17:49032258-49033530 | Right_Atrium | SE_51156 | chr17:49018220-49035057 | Skeletal_Muscle | SE_54412 | chr17:49030869-49034362 | Spleen | SE_54634 | chr17:49031082-49034752 | Stomach_Smooth_Muscle | SE_57824 | chr17:49030927-49033111 | VACO_503 | SE_59738 | chr17:48979175-49044314 | Ly4 | SE_65373 | chr17:49030870-49033427 | Pancreatic_islets |
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| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr17 | 49032200 | 49032260 | chr17 | 49031200 | 49032200 | chr17 | 49031092 | 49031200 |
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| Number: 2 | ID | Chromosome | Start | End |
GH17I050952 | chr17 | 49030112 | 49030829 | GH17I050953 | chr17 | 49030850 | 49033890 |
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Enhancer Sequence | TGGCACAGTT TCTCTAGAAC AATCCCATGC TCATTTATCA ACAAGGAAAA CCCAGGCATG 60 GTGGCTCACA CCTGTAATCC CAGCACTTTG GGAATCTGAG ATAGGAGGAT CACTTGAGCT 120 CAGGAGTTCG AGACCAGCCT GGGCAACATG GCGAAACACT GATTCTGCAA AAAATAAAAA 180 AAAAATTAGC TGGGTGTGGT GGTGTGTGCC TGTAGTCCCA GCTGCCCGGA GGGCTGATGT 240 AGGTGGATAG CTCCAGCCTG GGAGGTTGAG GCTGCAGTGA ACTATGATTG TGTCACTGCA 300 CTCCAGCCTG GGCGACAGAG GGGAGACCCT GTCCCAAGAA ACAAAAAAAA AAAAAGAAAG 360 AAAGAAAGAA AGAAAGAAAA AGTGGGCTCT GGAAGGAGCC AGCCACCGTT GCCCTCTGGG 420 CACTCACCAT CTCACCCCTC AGGCTCCAAC AGGGTTCCAC GTGACCAATC CCCGAGGGGA 480 GAGGAGACTG CGGAGAGGAT GGGAGGCAAA GCACCTCCTT CAAGCTCCAG GGAGGCAGGA 540 GGATTTGTTT AGGAGTGGCC CTGTGCAGAG GTAGGGGCAT GGCTGAGAAC ACCTTGGGAG 600 GTGGTGTGAA GCTGAGTCCA GGAGCCGCCA GCCCTCCCTG CCACTCAGCT CAGGGGTCAC 660 TTGGGTAGCT TCAGCCTCAA CAGCCGTGGA GTCAAGTGTC TCCTCTACAA AAATAATTCC 720 CAAATAAGTC ACTGCCTTCA CCCCTGGGAC TGGCTGGTGC ACCCAAATTG GAGTCGCCAC 780 CCAGCCCCCT TGAGCATTGC CTTGCTGGCT GATCCAACAG AGGCAGAATT AGCTGATGAG 840 GCTACCACAG CGGGAGGGAA CTGACCTGAG GCCGCCTGGA GAGATGGGAC CCCGAGGGCC 900 CTTTCTGGCA CTACTCACTT GTTGGGTCTG GGGAATTAAA ACACACTCCC CCTCTCTGGG 960 TCTCAGTTTA ACAGGGAGGA GACCACCACC TTCCAAACCT CAGTGACGGC ATCAGGCTGG 1020 GGGTGGTGCT GGGCCTCCTG CGTCTGTGTC TGGAGACGCA GCTGACTCCC TGACAAGCCC 1080 AGACATGCAG CTGTTCCTGC AGAGGAAGCA GCAGGAACTG GGGAAGGGCA GAGCGCTGAG 1140 GGAGGGGCAA GAGGGATGCA AGGACACCAC AGTGACCGCG TGCAGCGAAG CGAGTATGAG 1200 CAGAGTCCCA ATCTCCAGGT CCCCTCTCCG CGGAAGCACT TTTGTCTTTA TTGGAAATTT 1260 CCTCCCATGT AACATCTGAC CTCTACCTTC TCTTCTACAG ATGAGCTCTG CTGTGAGTCC 1320 CAGCGGGCTG AGACACTGTG ACTGCCCACC TGTCCCCAGG TGCCCCTTCT ATACAGCCCC 1380 ATCCCTTCCC AGGGATGCTC AGTGGCTGCG GCCACCCTTG CTTTCTGCCA CTCAGCCCTT 1440 GCAGGGGCTT CACACCCCAA GAGGGGCAGT CTGGGCTGGG GCTCCTGGAC TCCCTAAGGC 1500 ATTATCCCAT CCCCGCAAGT TGCCCGGCCG GGCCCTGAAG GAAAGGGGCC CCGGACCCAG 1560 ACCCGAAGGC TGCTCACCAG AGGCTCTGCC CAGGGACTCT CACCTCTCCA GCCACTCCAA 1620 CTCCCCTCCG GCTTTCCTGT CATTTCCTGA TGCCACAAAT CTTCTGACAT CCTCCCTCTT 1680 CCCCAGTGAA TTTCTTCCCC AGGCCCTTCC CTTCCTCAAC CTGCTTCATA CTGGACATTC 1740 CCAGCTGGTA GGATCTGCCT GTGGCTCTGC ACAGGAGGCT GGGCAAGGGT GGAGAAGACT 1800 GGGGGAGCTG TCTCCCATGA 1820
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