EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS047-07396

Organism

Homo sapiens

Tissue/cell

Fetal_placenta

Coordinate

chr12:7095760-7097430

Target genes

Number: 28
Name	Ensembl ID

NCAPD2	ENSG00000010292
SCARNA10	ENSG00000239002
GAPDH	ENSG00000111640
CHD4	ENSG00000111642
COPS7A	ENSG00000111652
PTMS	ENSG00000159335
MLF2	ENSG00000089693
CD4	ENSG00000010610
GPR162	ENSG00000250510
U47924.11	ENSG00000256010
LEPREL2	ENSG00000110811
CDCA3	ENSG00000111665
USP5	ENSG00000111667
TPI1	ENSG00000111669
RPL13P5	ENSG00000240370
LRRC23	ENSG00000010626
DSTNP2	ENSG00000248593
SPSB2	ENSG00000111671
ENO2	ENSG00000111674
ATN1	ENSG00000111676
C12orf57	ENSG00000111678
PTPN6	ENSG00000111679
U47924.27	ENSG00000257084
SCARNA12	ENSG00000238795
EMG1	ENSG00000126749
PHB2	ENSG00000215021
U47924.19	ENSG00000255896
LPCAT3	ENSG00000111684

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3

MA0041.1

chr12:7097265-7097277

GATTGTTTGTTT

6.92

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH12I006987	chr12	7095272	7097057
GH12I006989	chr12	7097161	7097310

Enhancer Sequence

AAGTTTCTCT CTTTAAGCAT GAAAACCCTT AACCATTTGG AATGCTCGAA ATTAAAAAAC 60
ACCACACATA TTACTCTGCC TCTTTAAGTT GAATCTAATT TAACATTTTC TAGGTGTCTG 120
GATCGTATCT ATTCCAGAGT AAAGTCATGA TGGCTTTATG ACGTTCTGAG GTATGTGAAA 180
TTGTCTGCCT GACTCTAACA AGGCCTACAC TGTCCTGAGT TCTGAGTTCT TGTGTCCACT 240
TCTTATAGCC TGTCTGTCCC TTTCCTTGCT ACTCTGGGAT CAACAGTCAC CTCTTGAACT 300
TTTGGGGTGC TTGGCAATAG TTCCTCTCCC TACTCCTAAT TTACGGCAGG CCTTAGAAAC 360
CATAACCTTA TTTTAAAGGT GTAAAAAAAA AAAGATTTAA GACAAAAGCA AGGGGCTTGG 420
GTGCTTTCCT TATGGACTTA GGCCTGGTAA CATCTGTTCT GGCCACTTAG AGGCCTTGTG 480
TGCTATTTCT TGTTTTCAGG TGCGTTTTGC AGGAGGGGAC GTTGTTGAGT TCCAAACAGG 540
TGAGGTATTG CACACTAGCA AACACATGAG AAGAAGGCGG AGGAATTGGG AGAAAAATAA 600
AAAGAATGCA GCAGGCCAGG TTAGCAGGAA CGTTAAGACG GTGACGGAGA ACAGCAAAGC 660
CTGGAAGCAA GCCGCCGTGG AGAAGGAAGA ACTGTGCTGA GGTGAGTTGC TGTGACAACC 720
CAGGCTGATT TTGAGTATGT AAACACCAAA CCTTGTTCTT GGCTGCCGCT CAGCTCAGCG 780
GGCTTTGGAG CCTGGCTGCC CAGCCACCAC TTCAGGGATG TGCTGTTTTT AGGGAGGGTG 840
TGACCCTACA AGATGTTTCT GAGCCTTAAT GCTTTTTTGT GGGAGCCAAT GCTTAATATG 900
GTGGCTAGAG TTACCTGAAG AATCTATAAA AAATGACCGA AGCCCCTTCT GCTCACCCTC 960
CCACTCATCA GAGTTGGCTT CCGTGGGTCT GAGTGGGAAG GACTTCCACT TTTAACAGCA 1020
TGAGACACGG TTCTGACAGC CCCACTAACA TCCGAATGCA GGCCGCAGTG CTCAGTCCTG 1080
AGGATAAAAT TCTCAGCTTG GAGATTGGGG TTGATGCCTT ACCTTTATTA GCACCAGATG 1140
GGTTTGTAAC AACCCAGAGG TTTGTAAGAA CTTGTTGGCC GGGCGCCGTG GCTCACGCCT 1200
GTAATCCCAG CACTTTGGGA GGCCGAGGCA GGCGGATCAC CTGAGGTCAG GAGTTTGAGA 1260
CTAGCCTCAA CATGGAGAAA CCCTGTCTCT ACTAAAAAAA ATACAAAATT AGCTGGGCGT 1320
GGTAGTGCAT GCCTGTAATC CCAGCTACTC GGGAGGCTGA GGCAGAATTG CTTGAACCTG 1380
GGAGGTGGAG GTTGTGGTGA GCCGAGATCA CGCCATTGCA CTCCAGCCTG GCAACAAGAG 1440
CGAAACTCCA TCTCAAAAAA AAAAAAAGAA CTTGTTTGGC AGCACTGTAA CTGTTCCTTC 1500
TTTTTGATTG TTTGTTTAAA GCAGGGACTT CAGAAATTTA TTAGCAGGCG AAGGATGATG 1560
ACCTTTAGTA CACTCCAAAC CTGAGGATCT TCTACTAGAA TGGGACCTTT ATAATCCCTA 1620
ATGCTAGGGA CATTCAAAAT GCGTGTTTTT TTTTTTTTTT TTTGAGACAG 1670