EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS047-07379

Organism

Homo sapiens

Tissue/cell

Fetal_placenta

Coordinate

chr12:6875990-6876670

Target genes

Number: 19
Name	Ensembl ID

GAPDH	ENSG00000111640
COPS7A	ENSG00000111652
PTMS	ENSG00000159335
LAG3	ENSG00000089692
GPR162	ENSG00000250510
U47924.11	ENSG00000256010
LRRC23	ENSG00000010626
DSTNP2	ENSG00000248593
SPSB2	ENSG00000111671
ENO2	ENSG00000111674
ATN1	ENSG00000111676
C12orf57	ENSG00000111678
PTPN6	ENSG00000111679
SCARNA12	ENSG00000238795
EMG1	ENSG00000126749
PHB2	ENSG00000215021
C1S	ENSG00000182326
LPCAT3	ENSG00000111684
RP3	ENSG00000239701

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxo1

MA0480.1

chr12:6876338-6876349

TGTAAACAGGA

6.62

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

SE_33415	chr12:6870347-6882059	H2171
SE_41859	chr12:6874803-6878160	LNCaP
SE_46777	chr12:6874209-6878054	Ovary

Enhancer Sequence

CCCCGACGGC CCCGCGCGGC CCTTGCGCCC GGGTCCTGGC GGACCCCACT GCGCCCTCCC 60
ACCGCTCCCC GGCCCGGAGC TCCTTTCCCG GCTCCGCGCG GCTAGCGCCA GCGCCCTCTA 120
GCTGCCCTGC GCGCACCACG GCGCCCGGCC TCGCCGCTCC GGTCGCGCCG TCCCCCGCAG 180
CCGTCCCCAC CCCTCTTCGG CCCCACCTCG CTGACCGGAT CCCGTCCGGC TTCCCGTCCG 240
AACGCCCCGA GTCTCACTTT GCCGCGCCCC CTCCCTGCGC CCCGCTGCCG CGTCTTTGCT 300
TGCAACCTGA CCTCACCTTT CCTCGCTAAG CGGTTTGAGA TCCTCAAGTG TAAACAGGAC 360
TCTCCCTGGA GGCTGCTCCT CCGGGCCCCT CCCCGCGGCC CGACCGTCGC TCGCTTCTCT 420
CCCCGGACGG CGGCCGCCTC TGTTTTCTCG TTCCCTCCCC TCAGCTGGCT TTCAGCTTTC 480
TTTTCTCTTC ATCGTCCCCT TCCCGCATAC ACACTGAAAG AATCTCGAAT TCCTAAAAAT 540
TAGAAGCGGG GCAGGACTAG CCTTCGAAAA AGCCGAGGCT GGGCATTGCA TGGCATTGCG 600
TCGAGCTGTC CTCGCCCTCA TCAGCTCCCT TCCCCGGCCC CATCCGTTCG CCCTTGCCTC 660
TCTTCCAGCC TTCCTCTAAT 680