EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS047-01022

Organism

Homo sapiens

Tissue/cell

Fetal_placenta

Coordinate

chr1:38344000-38345750

Target genes

Number: 6
Name	Ensembl ID

C1orf122	ENSG00000197982
YRDC	ENSG00000196449
MTF1	ENSG00000188786
RP11	ENSG00000230955
INPP5B	ENSG00000204084
SF3A3	ENSG00000183431

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:38345430-38345442	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:38345434-38345446	AAACAAACAAAC	-	6.32
Nr2f6(var.2)	MA0728.1	chr1:38345223-38345238	GAGGTCAGGAGTTCA	+	6.22
Nr2f6(var.2)	MA0728.1	chr1:38344711-38344726	GAGGTCAGGAGGTCA	+	7.19
Nr2f6(var.2)	MA0728.1	chr1:38344719-38344734	GAGGTCATGAGGTCA	+	7.34
RARA	MA0729.1	chr1:38344719-38344737	GAGGTCATGAGGTCAAGA	+	6.72
Zfx	MA0146.2	chr1:38344565-38344579	CCCGCCTCGGCCTC	+	6.01

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I037877

chr1

38342909

38346557

Enhancer Sequence

ATGCAAAGTC CACACTGGAA GTACTCACAG AAACAGCAGT GCCCGCTGCC TGGCGAGTGC 60
CCTGGCTCAG GTGGGGAGTG ATGAATCAGG GCCTTCATGT CCATGTGGCT AAGTCATCTG 120
AGGCAGCAAG AGCAATTCGG GCCCACCAAG GGATAACATG TATCCTGTGG GTATCATCCA 180
AAACAACCAT GAAAGCTCAA AGCCAAAACA GAGTTCAGAC TGATTCTCTG ATCTTTATCC 240
TCCTATGAGA ATCAGGAGAG AATTAAAAAA CCAATCTGAC AGTAAGCATG CTATGGTCTT 300
TATTTTTTAT TTTTATTTAT TTATTTATTT ATTTTTATAG AGATGGAGTC TTGCTCTGTC 360
GCCCAGGCTG GAGTGCAGTG GTGTGATCTC AGCTCACTGC AACCTCCACC TCCCAGGTTC 420
AAGCAATTCT CCTACCTCAG CCTCCCGAAT AGCTGGGACT ATAGGTGTGC ACCGCCATGG 480
CTGGCTAATT TTTTGTATTT TAGTAGAGGT GGGGTTTCAC CATGTTGCCC AGGCTGGTCT 540
TGAACTCCTG AGCTCAGGCA ATCTGCCCGC CTCGGCCTCC CAAAGTGCTG GGATTACAGG 600
CGTGAGCCAC CGCACCCAGC CTATGGTCTT TAAAAGATCT TGGTTAAGGC CAGGCACGGT 660
GGCTCACGCC TGTAATCCCA GCACTTTGGG AGGCCAAGGC AGGGGGATCA TGAGGTCAGG 720
AGGTCATGAG GTCAAGAGAT TGAGACCATC CTGGCCAACA TGGTGAAACC CCGTCTCTAC 780
TAAAAATACA AAAATTAGCT GGGCATGGTG GTGTGTGCCT GTAGTCCCAG CTACTCGGGA 840
GGCTGAGGCA GGAGAATTGC TTGAACCCGG GAGGCAGAGG TTGCAGTGAG CCGAGATTGT 900
GCCACTGCAC TACAGCCTGG CGACAGAGTG AGACTCCGTC TCAAAAAAAA AAAAAGATGC 960
TAGTTAAGAG AACAGCCTCT GAATTCCCAC TGCCTGGGTT CAAATCCTAC CTGTACCCCT 1020
TGTCTGCTTG GGGGCCTCTT TAATTTTTCT ATGCTTCAGT TTCCAATCTC ATAAAATGAG 1080
GTTAATAAAT CATACCTACT TCAACAGGTT CTTGAGGATT AAATGAGAAA ATAACAAGGG 1140
CATCAAATAG TACATGGCAC ATGGTAAGCA CTAATAAAAA TATTAACTAC TGACTTTGGG 1200
AGGCTGAGGC AGGCGGATCA CTTGAGGTCA GGAGTTCAAG ACCAGCTTGG CCAACATGGT 1260
GAAACCCTGT CTCTACAAAA TTAGCTGGGC CTGGTGGCAC ATGCCTGTAA TCCTAGCTAC 1320
TTGGGAGGAT GAGGCAGGAG AATCGCTTGA ACTCGGGAGG CAGGGGTTGC AGTGGGCCAA 1380
GATCCAGCCA TTGTACCCTA GCCTGGATGA CAGAGCAAGA CTCTGTCTCA AAACAAACAA 1440
ACAAACAAAA ATATTAACTA CTGTGTAATG TCCAAGTACC AGCTAAGTTA GTTGGAATCA 1500
TCTCATCCTA GGCACAGCTA AAAAGTAAAC CAGTATTAAA ATTATGGAAC AAAGGCTAAG 1560
GCAGTCACAA AGTTAATACA TGGGAAAGAA GCCTGCTTCA TGAGCAGATA CTGAGAGAAA 1620
ATGTTTGATC AGAGTGCAAA ACATAGGGAA AAAGTCACAG GAAGCATATA TTCTTCCTTA 1680
GGTCCAAAAG GGCAAGTACT TCCCAGAATT TCTGGGTTTC CGTTTGCTCA ACCCTTTGAA 1740
GCAACCTCTG 1750