EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS046-19389

Organism

Homo sapiens

Tissue/cell

Fetal_muscle_leg

Coordinate

chr2:55843150-55844270

Target genes

Number: 6
Name	Ensembl ID

CCDC88A	ENSG00000115355
BTF3P5	ENSG00000233594
U6	ENSG00000239189
CCDC104	ENSG00000163001
SNORA12	ENSG00000212175
SMEK2	ENSG00000138041

SNPs

Number: 1
ID	Chromosome	Position	Genome Version

rs782590

chr2

55843413

hg19

dbSUPER

Number of super-enhancer constituents: 12
ID	Coordinate	Tissue/cell

SE_13640	chr2:55841847-55846869	CD34_Primary_RO01536
SE_14752	chr2:55841645-55846865	CD4_Memory_Primary_7pool
SE_17088	chr2:55842748-55846855	CD4p_CD225int_CD127p_Tmem
SE_17620	chr2:55841154-55847802	CD4p_CD25-_CD45RAp_Naive
SE_18104	chr2:55842001-55847393	CD4p_CD25-_CD45ROp_Memory
SE_19025	chr2:55840129-55847025	CD4p_CD25-_Il17-_PMAstim_Th
SE_20621	chr2:55842995-55846801	CD56
SE_21012	chr2:55842179-55846809	CD8_Memory_7pool
SE_21659	chr2:55842966-55846806	CD8_Naive_7pool
SE_22794	chr2:55842848-55846904	CD8_primiary
SE_35447	chr2:55842218-55846812	HepG2
SE_64914	chr2:55841986-55846597	NHEK

Enhancer Sequence

TCACCCTATT CCCATACACC CTTAAAGGAA AAATTAATCT AAAACCAACA ATCAAACCAA 60
GGAATGAGGA GACTAGATGA CTATTAAAAT TTTATTGAAA TAAAAATTTT AAGGTCTAAA 120
TGACCACTTC AAGCCATTCG TTTTAACAAA AGTTGTTTTA TTGCATTCCC AGTTTAACAA 180
ATAATGCAAA TTACAAAACA AAAACATCAT GACAGGGATT AAATACTTAG TATAGAAATT 240
ACAGTGCTGC ATTTATCCTT TCCTCATTAA GAACAAAAGA ACACCTTCTG TAGAAGTGAT 300
GACTATTTAA AATAAAAGGG AACAAGCAAG AATACAAAAT ATGTCAAGAC TAAACCTAAG 360
ATTATTTTTC TAACTGCCTA TATCAGTTGT TCAAATCAAG TCCAGATTAT ACTATAAAAG 420
GCATTTTAAT TACGGCTCTA CATTTTGTAA TTTAAAATAC TTCACATGAC TACAATAAAC 480
CAAAGAACAC AGCAGTTTAC AACCTGCTTT GGTGTCCCAA CTTGCTTAGA TTGTAAGGCA 540
TTCACTTTCT CATAGCGCCT TCTACAAAGG CAGCCCGAAG AAATGCAGAC TACAGATGTA 600
TGTGCTTGTG TGTCCATGTA TCGTGGCAAC AGTCAGCAAT ACAGCCAGGA AAACGTGCCT 660
TTCGGTTTTC CCCAGCACCT GTCGACTGTG GCACCTGGGG CCCGTTGGTA CAATTTTTTT 720
TTTTTAAAAA CACTCGGAAA GAAAAGTTTC CCTAAACCGT TTGTACTAGA CGTATAATGG 780
ATAAGTAAAT AAAGGGGGAG GAAGGTGTCA GCTCCTAGGG CGACATCAGT ACCTAGTCTC 840
TCACTACTTC CTCCCTTCTC TCTCACACTC TCCCCTCTTC AAAAGAGGAG GGACTGGAAA 900
GGAAGGAGTC CAATCCTTAA GAGAGATGGG AGAAGGACAG AGAGTCTCGG TCTCCGAGGA 960
TAAGTCCAGT CAAAAGTACA GTACTTTGTT TTTGCCGTAC ACAAGAGCCA GTTCAGAACC 1020
AACGCGCTGT CCCGAAGGAG TAGCAACGGT AACGGGCCCA GGGCCCTAAA CCCAAGCTGT 1080
GCCCCAACCA GAGGCACTAT CCCCTATTCT ACAGTTCCGA 1120