Tag | Content |
---|
EnhancerAtlas ID | HS046-00402 |
Organism | Homo sapiens |
Tissue/cell | Fetal_muscle_leg |
Coordinate | chr1:19716400-19720060 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CTCF | MA0139.1 | chr1:19717998-19718017 | CGTCCAGCAGAGGGCTCTG | + | 6 | NEUROD2 | MA0668.1 | chr1:19717661-19717671 | GCCATATGGT | + | 6.02 | RREB1 | MA0073.1 | chr1:19719513-19719533 | CCCCACCCCACCACCACTAC | + | 6 | TEAD1 | MA0090.2 | chr1:19717870-19717880 | CACATTCCAT | + | 6.02 | TFAP4 | MA0691.1 | chr1:19717593-19717603 | AACAGCTGAT | + | 6.02 |
|
| Number of super-enhancer constituents: 23 | ID | Coordinate | Tissue/cell |
SE_01631 | chr1:19716172-19718011 | Aorta | SE_01631 | chr1:19718069-19719052 | Aorta | SE_04046 | chr1:19716514-19718685 | Brain_Anterior_Caudate | SE_05077 | chr1:19716739-19718770 | Brain_Cingulate_Gyrus | SE_05833 | chr1:19716201-19720492 | Brain_Hippocampus_Middle | SE_18410 | chr1:19716176-19720317 | CD4p_CD25-_Il17-_PMAstim_Th | SE_25786 | chr1:19716549-19718828 | Duodenum_Smooth_Muscle | SE_26537 | chr1:19716179-19720568 | Esophagus | SE_28013 | chr1:19716841-19718501 | Fetal_Intestine | SE_28668 | chr1:19716604-19718754 | Fetal_Intestine_Large | SE_31164 | chr1:19716409-19719128 | Fetal_Thymus | SE_31447 | chr1:19716397-19718506 | Gastric | SE_42185 | chr1:19716243-19719159 | Lung | SE_45720 | chr1:19716651-19718686 | Osteoblasts | SE_46635 | chr1:19716568-19717616 | Ovary | SE_48688 | chr1:19716506-19718426 | Right_Atrium | SE_50058 | chr1:19716289-19720556 | Sigmoid_Colon | SE_51211 | chr1:19716277-19718925 | Skeletal_Muscle | SE_52345 | chr1:19716229-19719127 | Small_Intestine | SE_52345 | chr1:19719159-19720550 | Small_Intestine | SE_54550 | chr1:19716169-19718904 | Stomach_Smooth_Muscle | SE_65446 | chr1:19716642-19717397 | Pancreatic_islets | SE_65446 | chr1:19717662-19720701 | Pancreatic_islets |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 4 | Chromosome | Start | End |
chr1 | 19719653 | 19719907 | chr1 | 19717195 | 19718433 | chr1 | 19716796 | 19717030 | chr1 | 19717212 | 19718898 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH01I019389 | chr1 | 19716333 | 19720569 |
|
Enhancer Sequence | ATACTGCCAA TGACTTTCAC CTTACTCCTT CCTCACCACT TAGCATTTTT CATTGTGAAT 60 TGACTCCACA CCTACAGAGG CCAAGACAGG CCCTCCAGCC TCAGCGCAGC ATCACGCCCG 120 CTGCAGCAGG GATCAGTCAA TGCATGCTGA TTCCATGTAA GTGGATATTA ATCCTGTGGT 180 CTGAGGCCAT ATTACAGAAC CAGAATGAAG GCAGTGTATC TCTGTAATCT AACCAGTCCC 240 TACACTCATC TGAACCCCGG CCCCCGCCCC CTACTCATGT CGAGTGCTTA GAGCAGTGGA 300 AGAAATCACA TTAAGTGTCA CAGACCATGG GTTTGTACAG TGATTTAAAT GAAACGACAG 360 GTCCAAACAA AGCCGAGAGT TCACTTTGGG GTGCATGTGG CACTGGCTCT GTCGCCTCCA 420 AAGCCAGGGA GGGCCTCTGA GGAGGAGGAG CGGTGCTGAC ACGCGGCAGC CGGATGGTTT 480 CTGTCTAAAC CACCCATCTG AACTGCCTAA CGGCCTTGGA GGGAAGGTTC AGATAACACC 540 AAAGGTGTCA GACCAATCCA GGCTGTTGGG GGGATTTAAA CATAATTCCC AGTGACTTGG 600 AATAATAAAC ACTACACTGG TCAGGACAGT GCCTGCCGTC TTTCTGGTGG GAGTTCAGGG 660 CTCCACCAGT TCCTCTGCTG CCACAGGAGT GTGCCCACCC CAGGGAGCAG GAGCCACAAG 720 TCCTTCACCA CCGATACTTT TGCCGGGCTC GGTGGTACCC AGGAGGCCAC TGGAAAGACG 780 GGTGGGGAGT GGGTAAAGTG AACTAGGGCA GGGAAAAGAA AAAACCCCAG AAGGTAGAAG 840 GTAAGGGAGA GACTAGGATG CCATTGGCAA CGGCCTCAGG TGACACCTGA ATAATAATCC 900 GTGGAAGGAC CAGGTGATCG TAATAGCCCT GCCCTGCGTG GCAGGCACTA TGCTAGCAGC 960 TCTCCCTGCC CTTCCCTATG ATCCTGACAA TGGCTCTTCA CACAGACACG CACTCCAGTC 1020 CTTGTTTTAA AGAAGGGGAA ACAGGGCCTT AGAGAAATAA CTTGACCGGA GCCACGCAGC 1080 TACGGGCCAA TGTCTGAGGA AGGACATGCA GTTATATACA GCACAGCTAG GTTCAAAAAG 1140 AAACTGCTTT TCCCAAACTG AACACTTTTT TTTTTTCTTA AATCATCCAA CCCAACAGCT 1200 GATCACACGA AGAGATACAA ATCAGAAGTT TCCGGCCACA AGTGAGGTTC GTGTTTGTGC 1260 CGCCATATGG TTCTACTTTG CCTCTTCCTC TTCTCCATTA GTTATTAATG TTGAAAAAAA 1320 TTGTTCAACC AGAAAAAGAA ACTTGAGATG AACCCTTAAA AAAAGCACAA AAGCCAGAGC 1380 AGCTCAGACC CACGGAGTCT AACCCACGGC GCCCTTGTCT TTAAGAAGTG CACCCTTGTA 1440 CCTCGGTTTT TTAAAAAATG GCCAAATGAA CACATTCCAT CTTTTGATCT GCCTGTTGGC 1500 CGAGAGCCCA CCACCAGCAA GATAGGAATC AAAAACAGAT TCTGCGTACT TGGGTGCACT 1560 CAGAGGAAAC TGCCACGCCA GAATGCTGCA GCTGCCGACG TCCAGCAGAG GGCTCTGTGA 1620 CAATTTGTTC CTTTTATTTT TCCAGAAGGC CCAAAACTTT CTTAAAAAGA TAAAAGAGCA 1680 TTTCAAGTGG CACATACACT CGTGTCAGAA ACAAAATATA CAGTGTGGCA TTCTGTAAAA 1740 ACACCAACCT CGAAACCGAA CAGGTTCAAA TCCTCGGTCA GTCACTTGCT GGCTGAGTGT 1800 AACCTTCCTA AGTCTCTGGA ACTGGGGGTT ACAACATCCA TGTCAAGGAG AAATTCACAC 1860 TGTTCCATAA ACCCCGAATG CCCGCTCCAG GCCCGTGTCA GGTGCAAGGG CTCAGCACGG 1920 GAAGAGATGG ACATGGGCGG CCCTGCTCTG ACAGCAAAGT CCAGCCACAG AGGCATCTCC 1980 AAGAGGCAAG GGTAGGCCAG GCATGGTGGC TCACGCCTGT AACCAGCACT TTGGGAGGCT 2040 GAGGAGGGTG GATCACTTGA GTTCAGGAGT TCAAGACCAG CCTGGCCAAT GTGGCAAAAC 2100 CCCATCTCTA CTAAAAATAT ACAAAAATTA GCCAGGTGTG GTGGTGCATG CCTATAATCC 2160 CAGCTACTCA GGAGGCCGAA GCAGGAGAAT CACTTGAATC TGGGAGATAG AGGTTGCCGT 2220 GAGCCAAGAC TGTGTCACTG CACTGTAGCC TGTGCGACAC AGAGAGACTC TGTCTCAAGG 2280 TAAAAAAAAA AAAAAAAAAA GAGGCAGGAA GCGAACCTGC AGGAGACGAC AGAAGGGGGT 2340 TGCTGTGGGG GCAAGTCAGC AGTCTAGGAG GTGGCACAGA GATGACATGT GAATAATGAC 2400 CAAGGAGCCG GCCCTCCAAG ACTGCAGGGA AAAATAACAG GGGCATCCCA AGAAGAGGGA 2460 AGAGCTGGCA TGAGGCTCTG CTGCAGAGGC CACTGAGGCA AGTGCAAGAA CAGAGAGGAG 2520 CAAAGCGCGG CTGGAGTGAG ACCCAGTGAG GCAGCACGCA GCACCTCCTG GGTCACTCCA 2580 AGTGTGAGGG CAGGCCCTGG CACACTGCTT TTCTTAAGAA TTAAAAAAAA AAAAAAAAAA 2640 AGGCCAGCTG CGGTGGCTCG CTTGAGATCA AGAGTTCGAG ACCAGCCTGG GCAACAGGGC 2700 AAGACTCCGT CCCTACTAAA ATAATAATAA TAAAAATAGC CAGGCATGGT GGCATGTTCC 2760 TGTAGTCCCA GCTACTCAGG AGGCTAGGGT GGGAGGATTG TTTGAACCCG GGAAGTCGAG 2820 GCTGCAGTGA GCCGTGTTTG CACCACAGTA CTCCAGCCTG GGTGACAGAG TAAGAACCTG 2880 ACTCAAGAAA AAAAGTGTTT ACTTATGTAT AATAGGTAAT ACATTCACAT AGGTCAGAAT 2940 TCAAAAAGGT ACAAGAGCAC ATGCTGGGAA AGGCCTCCCA GTGAGGGCCT GCAAGCTGGC 3000 TGTCCTCGCC TAGGGAGATG GCCTCCAGGT CAGGATCCCT TCAGTGGGGC TCCCTTCACC 3060 GGTCTGTCCA GATGGACACA TGGCCTCCAC CAGCCTATGA GAGATGCAGG AATCCCCACC 3120 CCACCACCAC TACTTAGTGT AGAGAAAACA CAAGCCTGCT CCCCAACTCC CCAAGGGCAG 3180 CTTCGTTACA GGGACCCCAG TTTGTCATTA GGAACACTGA GCCACGGAAG CACAGCTTCA 3240 TGTAGCCGAG GCTGGAGCTT CCGACCCATT TTGCCTAATG GCTCTCTGAG CATGGCCACC 3300 TCTGCAATGA GAAGGCACCT GCACAGGCGG CAGCTTCGCG CCGGGCCTGA AAGTCACACC 3360 CGGGTGGCCA AGCTTGTTTT TGGACGGGAA GCAGCTGTGC TCCCAGAGAC TCAGGCAAGT 3420 GGTACCCCTG AGTAACCAGA GGGGGACCCC AGGGGCTCCC GCTCACCCCA GGAAGCATCA 3480 AAACATATCT CCTTAGGATA ATAGCCACGT GAGCTAGGGT ATGGCGCACC TATTCGGAGG 3540 CAGGATTGAG GGCACCCCCC AACCTGTGGA TGAGAAAACC CAGGCACGGG GAAGCTGCTG 3600 GCCCCGGCTG TCCCAGCCAA CACGAGGTGG AGAGGAATGA GAATCTCAAT TTGAGACTGA 3660
|