EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS046-00056

Organism

Homo sapiens

Tissue/cell

Fetal_muscle_leg

Coordinate

chr1:2574370-2575380

Target genes

Number: 3
Name	Ensembl ID

RP3	ENSG00000225931
RP13	ENSG00000237058
MMEL1	ENSG00000142606

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

E2F6	MA0471.1	chr1:2574921-2574932	GCTTCCCGCCC	-	6.02
INSM1	MA0155.1	chr1:2574927-2574939	CGCCCCCTGCCA	-	6.07
KLF5	MA0599.1	chr1:2574671-2574681	GGGGCGGGGC	-	6.02
NRF1	MA0506.1	chr1:2574631-2574642	CGCGCAGGCGC	-	6.14
PPARG	MA0066.1	chr1:2575050-2575070	CTAGGTCCCGATAACCCAAT	+	6.2

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I002640

chr1

2572379

2575568

Enhancer Sequence

TCGAAACCCC GTCCCTCGCC TGCGGTGCGG CCCGCGGGAC CGCCCCTCTC CGGGCGGAGG 60
CACCTGACCC CGACCCGTAG TTCACGGCCC GGGGTGGTAG TGAAGCCTCG GCCCGCGCAG 120
GACCCGCACA TTTGGGCCGG GTCCATGGCA GCAGGAGGGC GAGGCCCCGA GCAGCTGTCG 180
GACCCCGGGA GCCCCCAGGC CGCCCCAGTG GGGAAGGGCG CTCAATCCGA CCCCAGACTC 240
CCCTGAGCCC GCGGCTCGGG CCGCGCAGGC GCAGTGCCAC CCGGAGGGGG CCGCCTGCCG 300
AGGGGCGGGG CGCAGGAAGC GGGGCGAAAC CACTGTTGGC TCATTTCCGG GTGGGTCCCC 360
GTCTCCAGGC AACCATTTCG CGTCCTGCAG ATTCTTGCCT GTGCCGGGAG CCGCCTCCTG 420
GCGCCGCAGC CCAGCCGTAT TCTGCAGCCT CGGAGACCCG CGTCCAGCCC CGCCTCCGGG 480
CTCGGTGACC CCCGTTCAGG AGACCCCATC TAGCCGCCTC CTCTGGGCTC CGGGACCATG 540
GCCCCAGCCA GGCTTCCCGC CCCCTGCCAG GCCCTGCTCC CACCTCGAAG ACCCCAGCAC 600
AGACCCCTCC TCCTGGCTTG GAAACGCCCA GTCCCTCTGG GAGCTCTGAG ACCCCACCCC 660
GCCCAGCCCG GCCGCCTCCT CTAGGTCCCG ATAACCCAAT CTCAGCGTTG CTCTTCAGCT 720
CGGGGGGGGC AGCGGCGCCC CCTCTGCAGC ACCGAACTGC CCCTTACACT GGTGTAGCCC 780
CGACTCCGCC ATGAGCTCCC TGTTCTTCCT AGTGTGGTTT CTGTTTTCCT AAGTGGCCCC 840
GGAGTGCTAG AACCCGCTGG TGTCAGGAAG CATTAAGGAG GTGAAATCCT GCCCAGGCCC 900
CACTGGGGTG TAGTTCTGCC TCTGGGACCC CAAAGCCTGC TGTGCTCTTG GCCTCCCAGC 960
CTGCCTTGTC CCCACGTGCC TTCTCCCGGC CTGCCATGGG TTTGGGGTGG 1010