Tag | Content |
---|
EnhancerAtlas ID | HS044-05684 |
Organism | Homo sapiens |
Tissue/cell | Fetal_kidney |
Coordinate | chr17:40530230-40531780 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr17:40531224-40531245 | GTTTACTTTCTCTTTCAAGCT | + | 6.48 | Nr2f6(var.2) | MA0728.1 | chr17:40530483-40530498 | TGAACTCCTGACCTC | - | 6.22 | POU2F2 | MA0507.1 | chr17:40531469-40531482 | TACATTTGCATGT | + | 6.27 | STAT3 | MA0144.2 | chr17:40531213-40531224 | TTTCCCAGAAG | - | 6.62 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_00115 | chr17:40529898-40532391 | Adipose_Nuclei | SE_13886 | chr17:40530213-40532244 | CD34_Primary_RO01536 | SE_19969 | chr17:40530752-40531839 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_26078 | chr17:40530152-40532057 | Duodenum_Smooth_Muscle | SE_28200 | chr17:40530088-40532199 | Fetal_Intestine | SE_29248 | chr17:40530171-40532136 | Fetal_Intestine_Large | SE_45847 | chr17:40530475-40532188 | Osteoblasts | SE_51352 | chr17:40529907-40532431 | Skeletal_Muscle | SE_52922 | chr17:40530438-40531983 | Small_Intestine | SE_59315 | chr17:40514717-40567820 | Ly3 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH17I042377 | chr17 | 40529879 | 40532876 |
|
Enhancer Sequence | CTATGTATAA GCGTTACCAC CCTAATTATG CTTGTTTTTG TTTTTTTGGT TGTTTGAGAC 60 GGAGTCTCTG TTGCCCAGGC TGGAGTGCAG TGGCACGATC TCGACTCACT GCAACCTCTG 120 CCTCCCAGGT TCAAGCGATT CTCTTGCTTT AGCCTCCAGA GTAGCTGGGA TTACAGGCAC 180 GCGTCACCAC ACCCAGCTAG TTTTTTGTAT TTTCAGTAGA AACAGGATTT CACCAAGTCG 240 GCAAGGATGG TCTTGAACTC CTGACCTCAA GCAATCCACA TGCCTTGGTC TCCCAAAGTG 300 CTGGGATTAC AGGCGTGAGC CATCGCTCCC GGCCTCCTAA TTATGTTTCA TTTTGGTTAA 360 TGTTTCAATA AATGTGCTTT CCCTAAACAT ACTGATGAAA AGAGGCCCAA ATGCAAAACT 420 GATTTGTCGA GAAAGTCAGT CTGAGATGAA ATATTTATTA TGTCTAAACC ACAAGTAGAA 480 AAAAATTCAA AGGCCGACTA TTTCAATGCT AACTCAATGC AATATTGCAC TTTGTTTGGT 540 TTACGGGAGA GGTAATTTAC ACAGCTAACA TTTGGGTTTT CAAGATTACA TTGTGGGGAG 600 AGAAGGGGAA AACAAGAAAA GTCTAATGCT TTTAGATTCT GTCAGAAAAA GTGTTTGCTA 660 AAAAGCAAAA CAAAATGAAC ATGAGAAAAA ATGTGAAAAA ACATGCATTT TAGGAAGCTT 720 TCACCGAAGC AGGTGCTCAA GTTCAGACTC AAATCTTCCA ACTCTTGTAA TAAAAATGAG 780 AGGTCAGAAT ACCACAAACT AATCAAATCA ATCAAACAAA GCGGGAAACA GGTGGCTGAC 840 ACCAGACTGG GCAGGGTTTT CCTAAATTGG GCTTACCTTC ACTAATCCAA ATCAGTTTTC 900 AGAAATGGCT TCTACAAAAA CTACCCAAAC ATCCCCCTAA TAATTTGCAC TCCTCCTCCA 960 CAATAGGGAA GCCAAGCCGT TTATTTCCCA GAAGGTTTAC TTTCTCTTTC AAGCTCTGCT 1020 GGCTTCTTCC TGCCCCGCAT ACGGCCAGGA AAAAAGAAAA GCACTGCCTT TTCTTTCCTG 1080 CCTTCTCTAA AACTGGGGAG ATGGGGTGAG AGAACCTGTT TCATGGACAA GCTGGGTGGT 1140 TCTTAACTGC AACACTGTTC TGAATACAGA TTAGTTTGCA AAGGAAAGTT ACAGGACAGG 1200 AAAATAAAGG TCTACCCCTC CAACTAACTC ATACACATGT ACATTTGCAT GTACGCACAC 1260 ACACAGATGT GAGGGCACAT TTAATTCAGC TGAGTAATGT GCAGCAATCA GCTCCCAGCT 1320 TCATACCTGG CCACCGGGAT GCCTCCTCAC TCCCACCTTC TTTACCTGAC TCAAAATAAG 1380 GTTCCTCCTG TTGGCTTCTT CCTGAGACAC AACCAACTCT AATCATTCCT CTTCCCCTCA 1440 AACCTTCAAC ACTACCTGCA CTTTCTGGGT CGGGAGCAAT TCCTTGGGTG GTAATCCATT 1500 TTTAATGTGT TAAATATTAC TTAAAATAAG GGAGAGGTAA TCATGGACTG 1550
|