EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS044-00088

Organism

Homo sapiens

Tissue/cell

Fetal_kidney

Coordinate

chr1:12556230-12557550

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1

MA0137.3

chr1:12556742-12556753

TTTCTAGGAAA

6.14

dbSUPER

Number of super-enhancer constituents: 10
ID	Coordinate	Tissue/cell

SE_00009	chr1:12555946-12557524	Adipose_Nuclei
SE_01743	chr1:12555539-12557934	Aorta
SE_15154	chr1:12553585-12557831	CD4_Memory_Primary_7pool
SE_28215	chr1:12555763-12557684	Fetal_Intestine
SE_39882	chr1:12555412-12558024	K562
SE_41209	chr1:12555364-12557258	Left_Ventricle
SE_41810	chr1:12556272-12556638	LNCaP
SE_42647	chr1:12555666-12557328	Lung
SE_49026	chr1:12555574-12557428	Right_Atrium
SE_54847	chr1:12554319-12557789	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I012495

chr1

12555443

12557768

Enhancer Sequence

CCTTAGAGAG TACAATTAAT AGTACTGAAG ACGTCCTTAT AACTGAACTT TTGTAAAATT 60
ATTGCTGGAT TTTTGTCTTT CCAGCACACA TTAAACCTCA CCAAGGTATG GGGCTGTCCT 120
TCAGATGTCA CAGCCTGATG AACTGAGTGC TGACCTGGCT TTGGGAGCAC TTTTCAGTTA 180
TCCCAGCTGT GCATGGCCCA TTGCATGGCC TGTGACAATT TTCTGGGGTT GTTTCTGTCC 240
ATATTTCCAA CCTGACTTGC CCACCAGGGC ACTTTCTGCC CTTGTAAGTA AATCTCTATG 300
CTGCTTACTG TTAGTTCCTG TTTCTGAAGT GCTGATTCGA TGTGTAAGGC TTCTCCTCTC 360
TTTTAGATCT GTCTAGAGAG GAGTGTTTTG CTTCAGTGAG CTCCAGGAAC AAATAATAAG 420
TACAGCAAGT ACAAGGCCGA GGACAGACCC AGTGCACTCT TATCAGTCAT CTGAAATATG 480
CACAGCCTTT CCAAGACAAA TGTGCACTCC TGTTTCTAGG AAAACACCAG AAAGTACTTA 540
CCAATTACCC TGTATATGCT GTGTGGAAAA AGACAACATC AGCCTACCCT GAAAGCCATA 600
ACAAAGCAGA TTCCTCCGGG CCGCCGACAG CTGAGTGGCC CGAGTTAGAG CCTCTGCAGA 660
ATCCCAGCCT GTGGCCTGGG CCAGGTCCAG GTCCAGGTCC AGGTCCAGGT CCAGGTCCAG 720
GTCCAGGGGG CATTCTTCCC CTCGCATGAT TACCACGTCC CTCACCCTTT GCCCAAGGAA 780
CTGACCTCAT CTTAGAAGAA GTCTCAAGGG TTGGTGTGTT CTTACTAAGT GCCCAGGATT 840
TTCTTCCAGA CCCATCACAA ATCCAAAGAT GGCTCTCCTG AAGAGAGGCC TAAAAAAGAG 900
GGTGCGGCCC AGGGGGATCT ATTATAGTAA TAACCGCAGG AACGAGAGCC GCCGCTGGTG 960
GGCAGCTCAC CATCCGCCAG GAGCAGGCTT GGCGGGCACT GTTTTATTTG GTCTTCACAG 1020
CAGTCCTCTA AGGTAGGTGT CATCGTCCTG TTTCAGAGAG AAAACGGAAA CTGAGGGTTA 1080
AGGAAGGTAA CCAACTTATC CATGATCACA TGGCCAGAAA ATGGTAGAGG CAGGATTCAA 1140
AGTCAAATGA GGGTCTTTAA CCGCTATTTC ATGGTGTATT CACAGGCAGT ACTGTAGGTT 1200
AATTCTGTTC ACTAAATGTA AAGTATGTCT CGTATTACAG AGTGCTTTTG TCTTAGTGAG 1260
AAAGGAAAAT CATTTTAACC TGCACACTTA ACCTCTTGGC TTTATGTCCA TTTACCCATC 1320