| Tag | Content |
|---|
EnhancerAtlas ID | HS042-38738 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr5:171870390-171871390 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Nkx2-5(var.2) | MA0503.1 | chr5:171871212-171871223 | CTTGAGTGGCT | - | 6.62 | | TBX21 | MA0690.1 | chr5:171870709-171870719 | TTCACACCTT | - | 6.02 | | TBX2 | MA0688.1 | chr5:171870708-171870719 | ATTCACACCTT | - | 6.02 |
|
| | Number of super-enhancer constituents: 18 | ID | Coordinate | Tissue/cell |
| SE_00928 | chr5:171870181-171871495 | Adrenal_Gland | | SE_04308 | chr5:171870187-171871168 | Brain_Anterior_Caudate | | SE_05113 | chr5:171869702-171874871 | Brain_Cingulate_Gyrus | | SE_06023 | chr5:171869875-171874707 | Brain_Hippocampus_Middle | | SE_07041 | chr5:171869742-171874591 | Brain_Hippocampus_Middle_150 | | SE_08116 | chr5:171869515-171874528 | Brain_Inferior_Temporal_Lobe | | SE_25970 | chr5:171869231-171871906 | Duodenum_Smooth_Muscle | | SE_26839 | chr5:171869745-171872389 | Esophagus | | SE_29714 | chr5:171870107-171871515 | Fetal_Muscle | | SE_32077 | chr5:171870181-171872383 | Gastric | | SE_43258 | chr5:171870141-171871492 | Lung | | SE_44523 | chr5:171869414-171872035 | NHDF-Ad | | SE_45975 | chr5:171869473-171872377 | Osteoblasts | | SE_46662 | chr5:171870200-171870783 | Ovary | | SE_46662 | chr5:171870819-171871468 | Ovary | | SE_50406 | chr5:171869661-171872462 | Sigmoid_Colon | | SE_53173 | chr5:171869663-171872373 | Small_Intestine | | SE_54733 | chr5:171869250-171872443 | Stomach_Smooth_Muscle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH05I172442 | chr5 | 171869697 | 171872485 |
|
Enhancer Sequence | AGGGCCCTCT GAATTCCACC CATGTAAAGA ACCCCACTGC TAGTCAGCTT TCCCAGCCCC 60
TGAACACCCC TTTGCTTTTG AACCCAGCTG ACAGTGCACC TCTCTGTCCC AGCAGGAACG 120
GGTACTCCAG GCCCTGTCGC AGCCCTTATC CTATGGAGAT GCATTCTGAA CAGATGGTGA 180
CCTCTGTGAG GACAAGACTG TGCTTGGTCA TCTTAGCCTC TCTCTGGCTC TGGGCCAGAC 240
CTGGCCCAGG GCAGACAATA AACCCACATC TGTGGAACTG ACTGGAAGCC AACAGTGGCC 300
TGAAGCCACA GGCTGCTGAT TCACACCTTG GCTGAGGAGG AGGAAATGGT GACGCCAACG 360
CGTGGGTTCT AGCTTTCTTT GCCAGCACAG CGGGCGGGGG GCCATGCAAT TCTGCTTAAT 420
TAAACAAAAC AGAAAATACC ATGCTTATGT GCTTGAAGGC AACTTTTCCA TTCAGGACGG 480
AGGTCGGGGC TGGGAAAGTG ACTATCCCCT TATTACCAGT CAGTGATAGG CAGGGGAGCC 540
AAAAGTGATC CTGGCAAACT GCTTCACCTT TCTAAGCCTC AGTTTCCACA TTTGTGAAAT 600
GGGCTAATAA CAGCATCCAT GTAGCAGACA TGTATTGTTT TTGCCTGTCC AAGCTCCATG 660
CCCCCTTCTC CCAGCAACAG CGCCCTGAAT CTCCTTCCAC AACTATCCCT CTCACTACCA 720
GTGATTTCAG TGGGACCGTC GATCTTAATA TCCCACTCAC ACCTGGCCCA TAGGGTCAGG 780
TAATCCGGCT GGGCCAGTCA GAGTCTCTCC TGGATCTGGA CTCTTGAGTG GCTAAAAGGT 840
CTGAAAATGG ATGGATCAGC TGCCTGCCTG GTGATGTCCT AATACCTACT GGAGTTCCCA 900
CTCCCTGGAT GGCTCCAGCT GCCCACGTTC TTTCCAAGAC TGGGTGCTGA GCTTTCCCCC 960
TGATTCTGAC AGCCCCACCT TTCCAATACA TTCTGTTTGG 1000
|
