| Tag | Content |
|---|
EnhancerAtlas ID | HS042-28204 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr20:35578400-35579830 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF2 | MA0051.1 | chr20:35579277-35579295 | GGAAACCGAAACCTAAAA | + | 6.37 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_10153 | chr20:35574610-35581142 | CD14 | | SE_12376 | chr20:35578009-35580938 | CD3 | | SE_14715 | chr20:35577318-35581091 | CD4_Memory_Primary_7pool | | SE_15913 | chr20:35577659-35580743 | CD4_Naive_Primary_7pool | | SE_16626 | chr20:35577994-35581076 | CD4_Naive_Primary_8pool | | SE_17465 | chr20:35567878-35581102 | CD4p_CD25-_CD45RAp_Naive | | SE_21583 | chr20:35577710-35581114 | CD8_Naive_7pool | | SE_22190 | chr20:35577686-35581058 | CD8_Naive_8pool | | SE_23043 | chr20:35577910-35581182 | CD8_primiary | | SE_26470 | chr20:35577698-35581080 | Duodenum_Smooth_Muscle |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
Enhancer Sequence | CAAGAGTTGA GGGGCCCATA AGGGAAGAGA GAAGTCCGAA TAAAGTTTGG TCAAGACAAA 60
GCAGAAGCTA AGACATGAGC AATTGGGAAC AGTTGGTCAG TTTTTACCAA ATGAAAGCAC 120
ATAGTGTCTT TGATAGCAAT AGGTTGTAGG TTTAAGGAAC ACACATCATT CTGGAGGGTA 180
ACGAGTTAAT CTACAAACCA CTGAAACAGA GAGCCAACCA CATTTTGAGA CAGAAAATAT 240
GGAACTACTT CACTCCACTT GTTGCTAGTC AAAGAAAATA AAGTAATAAT CCATCCCAGC 300
AGTGGAGGGA AACGAAAGGG CAAAAGGGGG AAGAAAAAAA AAAAAGGAGA AATGCAATTT 360
CCCATACCCA TTCAAGCTAT CTTTGGGTCC TGAACCACTA ATGTTCCTCC TACCCCAGTT 420
TCCAACCTAG CCAAACAGGG CCCCACCTAA CAAATGCAAA AATTTACTAA ATTTGCAAAT 480
CCCAACCACC AAAGAATCAC CTTCCTATTG GACACCTAGA GGATATAAGG CAGGAGTCAA 540
ATCTCACACC CACCACAAAA AGTTGAGTAG AATTCACAAG GATGGATGCT TGGATACGAA 600
TCAGTAAAAT ATGATTAAAA CTCAACCTAA ACACTTCTCC AGGGGATGTG GCCAAACTGT 660
GGCATGCTGG GGATTCAGTG GTCAACTGAA CAACCCCAAG GTTCAGATTT TGGAGGGGAA 720
CCTGCTTTTA AAGAGCAAAA CATGTTCCTT ACCATGTTCT GCAAGTGCAG TCAACACACG 780
CCTATCGGGC GCTGCTGGGA TGCCAAGGAA GGTGATGGGA ATTCAGAGAT TAACCAAGCC 840
AGTTCCTTCC CCTTCAGGAA AAGCCTCAAT TCAGGGAGGA AACCGAAACC TAAAAGCCCC 900
AGAACATCCT CTGATGTGGC AAGTGTTCAA GGAGCTGCGG TTAGCGCGGA GGGGTCCCGC 960
GAGCCTGGAT GACAGCAAGC CGCCCACCAA GGTCTGGGGA AAAATCTCCT TCTAACTAAA 1020
AAAAAGGGAC CCGAGTCTCG CTTGTCCCGC GCCGGGGTGG CAAGTTAGTG AAGAAACCCA 1080
CGAGAGTGAG ATCCCAATCT ACGACTGCCC CTCCCAGGTC CTCAATCCCG GGAGCCTGCT 1140
CCCATCCTAC GAATCGCCTA TCCCAGGCGA CCCCATGTCT TCTTCCTCCG CCTCGGGGAG 1200
TCAGTCCCGG GAGCCCCATG CCGCAGGCCC TCCTGGGAAC CCCCGCCGCA GGGCTCCCTC 1260
CCCCGCCTCG GGTCTTCCTT TCCTCGGCGC CCCCAGCGCA GGTCCGCCCT CCCGGGTGCC 1320
TCCCGCCGCA GGGCTCGCTC CTCGGCCTCG GTCCTCTCGT GGGGCCCCCT CCCTCAGGGC 1380
GCCTGGCCCG CGCCCCAGGT CGCCGCCCTT CGCCCCTCAG CCCCTCCGGA 1430
|
