| Tag | Content |
|---|
EnhancerAtlas ID | HS042-27654 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr20:1818850-1820260 |
SNPs | | Number: 2 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| RFX1 | MA0509.2 | chr20:1819380-1819396 | CGTTGCCATGGGAACC | - | 6.74 | | RFX1 | MA0509.2 | chr20:1819380-1819396 | CGTTGCCATGGGAACC | + | 6.7 | | RFX2 | MA0600.2 | chr20:1819380-1819396 | CGTTGCCATGGGAACC | - | 7.03 | | RFX2 | MA0600.2 | chr20:1819380-1819396 | CGTTGCCATGGGAACC | + | 7.15 | | RFX5 | MA0510.2 | chr20:1819380-1819396 | CGTTGCCATGGGAACC | + | 7.34 | | RFX5 | MA0510.2 | chr20:1819380-1819396 | CGTTGCCATGGGAACC | - | 7.3 | | SNAI2 | MA0745.2 | chr20:1819235-1819245 | AACAGGTGCA | + | 6.02 |
|
| | Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
| SE_04057 | chr20:1819079-1820385 | Brain_Anterior_Caudate | | SE_05054 | chr20:1806259-1820311 | Brain_Cingulate_Gyrus | | SE_06036 | chr20:1818835-1822807 | Brain_Hippocampus_Middle | | SE_06926 | chr20:1819070-1820469 | Brain_Hippocampus_Middle_150 | | SE_07894 | chr20:1818380-1820441 | Brain_Inferior_Temporal_Lobe | | SE_09273 | chr20:1818880-1823421 | CD14 | | SE_37018 | chr20:1819239-1823127 | HSMMtube | | SE_51714 | chr20:1819615-1820491 | Skeletal_Muscle_Myoblast | | SE_54036 | chr20:1819235-1820328 | Spleen | | SE_63500 | chr20:1819554-1820387 | HSMM |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH20I001839 | chr20 | 1819847 | 1822819 |
|
Enhancer Sequence | TTATAAACTT TGATTTAATT TTCACAAATA TTCTACGCCA TTATTGTCTC CATTTGAGAG 60
GTGAACAAGT TTGGCTCAGA GACTGAAGCC ATTTGCCCAG GGTCCCACAG CTTGCAGGTG 120
GAGCTGGGTT TGAACCCAGT GCACTCTCAA GCCTGGTTCT TTCCACTCAC CATGCTGCTT 180
TCCCTTCGCT CTCCGTTTTA CTGATGGGGA GACAGAGGGT TACAGAGCTC ACTCCCAGGC 240
CTCAGTCCTG CTGGGCCCTT TCACCCAAAG CATTCCTGGA TCCATGCAAC ATCGTACCTA 300
GAGGCAGAAC TAGAGGCCAT GATGACTCCT ATTCACAAAG AGGCTGCTCA GTGTGAGGGG 360
CAGAGCAGAA CCTGGCCTGG CTGCCAACAG GTGCATGGCC AGGTCTCCAA GGGAAGTGGC 420
CCCAGCAGCT CCCAGGCAGC CAGCCCCCCC TCAGCTGGGC AGCCCCTGAT CCTCCTCCCA 480
TCCCCCTGCT TTATGACCTG TTTTATGAGC GGGAGGCCTG GCAGCTTCCA CGTTGCCATG 540
GGAACCAGCC CAGTGCGGGC TCCTGGCAGC TCAATCAGGG ATTGGCAATT TTAAGTCAGG 600
AGCCAATCCT GGGGCTAGCG AGGGTTTCCA TGGGTTGGGG TCTGTGGGCC CCAGGGATGC 660
ACAGTGCCTG CCTGACTGTC TGCCTCTCTC CTCTGCTCCA GCTCCCCAGG TGCCCAAAGA 720
ACTCAGGGAC CCCACAGCTG GAAGATGACA GGCTGTTAGA GCCCTGGAGG AGCCTGGGGC 780
AGCAGGGAAT GACATGGACC ACCGAGTGGG GGCTGGGAGA GCTGACAGAG CTGGACCGTG 840
GACACACATG CTTAGGGGCA CACAGAGACA CTAGGACAGC TGACATGAAG GGACTCACAA 900
TGATATACAG ATACAGACTC ACACAGAGAA ACAGAGATAT GCACATGGCA GCCACATGTG 960
CATAGCAAAG AAAGGTACTT GCAAACACAC AGACATACAC AAATCCATAG GAATACCTGG 1020
GTGCCCAGAG ACTCACAGAC ACACAGACAT CCAAAGACAC ACACAGAGGA CACTTGGACA 1080
CCCAGAGATA CATCCAGACA TACACATAGA CACACAAAGG ACGTACAGAC ACACACTGCT 1140
CACTGCCTGT GTGGTCCAGG CAGCTTGCCC AAACTCTCTG AGACCCAATC GCATCATCTT 1200
TCAAAAGGGC ATCACAATCC TAGCTTGTGA GGACAGGGAG GAATAACGAG GAAAATGGCT 1260
GCGTGTGCTC AGACACCTTC ATTCATCCAG CCAGACAATA TTATTGAGCA TCTACTATGT 1320
GCCATGTGCC TCCTCCGAGC TGAGAACAGG AAGCTAACAA GGACCTACCC TCAGGAAGCT 1380
CACAGTCTCC TTCGGAAGAC AATAAATACA 1410
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