Tag | Content |
---|
EnhancerAtlas ID | HS042-25217 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr2:102421500-102422870 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
IRF1 | MA0050.2 | chr2:102422824-102422845 | CAGCTGTTTCACTTTTTTTTT | + | 6.49 | JUN(var.2) | MA0489.1 | chr2:102422727-102422741 | ATGAGTCATCTTCC | - | 6.77 | RREB1 | MA0073.1 | chr2:102422508-102422528 | CCCCACCCCACCCACCATAC | + | 6.28 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_03146 | chr2:102421711-102422783 | Brain_Angular_Gyrus | SE_03871 | chr2:102421490-102422596 | Brain_Anterior_Caudate | SE_04769 | chr2:102408513-102425197 | Brain_Cingulate_Gyrus | SE_05804 | chr2:102417058-102425480 | Brain_Hippocampus_Middle | SE_06691 | chr2:102409170-102425333 | Brain_Hippocampus_Middle_150 | SE_07723 | chr2:102421568-102423882 | Brain_Inferior_Temporal_Lobe | SE_10936 | chr2:102416737-102425312 | CD20 | SE_36624 | chr2:102421555-102423843 | HMEC | SE_45627 | chr2:102419404-102423997 | Osteoblasts | SE_56269 | chr2:102421571-102423793 | u87 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 2 | Chromosome | Start | End |
chr2 | 102421719 | 102421953 | chr2 | 102421973 | 102422867 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH02I101801 | chr2 | 102418316 | 102423990 |
|
Enhancer Sequence | CTCCAGCCTG GGTGACAGGG CGAGACTCCA GATCAAAAAA AAAAAAAAAA AAAAAAAGTA 60 ATAATATTTT GACCTTTTTA TTGAAGTGAA GCATGCATAC AGAAAAGTAC ACAAATTATA 120 AACTCAGTAA ATTTCCAAAA ACTGTACATA ACTCTTCAAT GGACCAGCAC CTAGATCAAG 180 AAACAGAACT TTGCCGGTAC CCCAGGAGTG CCCTGATATG CCTCTTGCAG TCACTAACTG 240 TTCCATGCAA GGGTGACACT GTCCTGACTT CTCTCACCAC ATATTACTTT TGCCTGTGTC 300 TGTTCTTGAT ATAAATGGAA CCATACGGTA CTCTGTGTCT GGCTTCTTTC AGTTAGCATT 360 ATGTTTGTGA GGTCCACCCA TATGGCTGCT TATAGGGAGA GCTCATTTAT TCTCATTGCT 420 TTTAGTATTC TGTGGTGTCC CACTAACATC CAAGTGAATA TATTCCTGCC GTTGATATAA 480 TACTGGTTAT GTGGCAGGTG CTGAATTGAA TTGCTGCAGA GATAGAAGGG AATTTACCTA 540 GTTTAGGAAA TTCTGTGATG GATAAGAGAT GCTGAGGTGC AGGTTATAGG GAAAATATTC 600 ACGTCTGTAT TTCTCATAGT TTGGGCATGG TTAAATATCC ACTTATTTTC TGACTTAATT 660 GTATTATCTT AACTGCAGGA GTCCTGAGAA AGAGCAGATG ACGTTGCTGG CGTGTGATGA 720 CTTGGGAACT TTACTCTCTG CTATCTTTGT TGGCTTACAC AGCTTTCCCA GCTGCTACAG 780 GTCTTCTGCA AAGAATTTGT GCAGCACTCT TTGGGATTCT TGTTTGGCCT GTGTCTCACT 840 GCCGCTTCCT TCTCACCCTG TTTCCAAGGT TGTCTACTTT CCTACCGACT TTGCTACACT 900 TGCAGCATGT CCTCCCCCTG CTCCCTTAAG ATGGTGTAGG TTTGGGGTGG AATAAAGATA 960 GGGAGACACA GCCAAATAAA TAAAATTCCA AGCAAGCCTG CGTTCTTGCC CCACCCCACC 1020 CACCATACCC TGCTCCTGTC CCTACTTTGT CTCTTACAGA TCATGAAGAA AGAAATCTCT 1080 TAAGTTCTAC TCATTCTTAT TTTTAATGAG AAGGATGTTT TAAAAACAAG GTCTTTGATA 1140 TGACATTTTG TCATACCTAG GAAAGCAACA ATAACAGCAG TAACTGCTAG GTTGAGGGAA 1200 TCTGTAGTTA GGTGGTATTT CCTGGTGATG AGTCATCTTC CCCCCAGGCC CCTTGGGGAT 1260 CTTTCTTTCG TGAATGAGTG AGGGGGAAGG CATTTATACA AGAAAAGAGT GAATGCCTTC 1320 ATTTCAGCTG TTTCACTTTT TTTTTTTTTT TTTTTGAGAC GGAATCTCGC 1370
|