Tag | Content |
---|
EnhancerAtlas ID | HS042-22678 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr19:19599370-19600960 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
FOXA1 | MA0148.4 | chr19:19599789-19599805 | TTTTGTTTACTTTAGA | - | 6.69 | FOXP2 | MA0593.1 | chr19:19599790-19599801 | TTTGTTTACTT | - | 6.62 | MITF | MA0620.2 | chr19:19600216-19600234 | AAGGGTCATGTGACCAAG | + | 6.19 | MITF | MA0620.2 | chr19:19600216-19600234 | AAGGGTCATGTGACCAAG | - | 6.19 |
|
| Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
SE_01191 | chr19:19597419-19601481 | Adrenal_Gland | SE_09215 | chr19:19595450-19601494 | CD14 | SE_11973 | chr19:19597794-19601624 | CD3 | SE_13867 | chr19:19597292-19601474 | CD34_Primary_RO01536 | SE_14578 | chr19:19595555-19601818 | CD4_Memory_Primary_7pool | SE_17284 | chr19:19597785-19601599 | CD4p_CD225int_CD127p_Tmem | SE_17695 | chr19:19595455-19601775 | CD4p_CD25-_CD45RAp_Naive | SE_18023 | chr19:19597051-19602095 | CD4p_CD25-_CD45ROp_Memory | SE_18475 | chr19:19595670-19601884 | CD4p_CD25-_Il17-_PMAstim_Th | SE_19438 | chr19:19598715-19601649 | CD4p_CD25-_Il17p_PMAstim_Th17 | SE_20088 | chr19:19597646-19601744 | CD56 | SE_22348 | chr19:19595603-19601745 | CD8_primiary | SE_24291 | chr19:19597429-19601354 | Colon_Crypt_2 | SE_29832 | chr19:19598800-19601612 | Fetal_Muscle | SE_31176 | chr19:19598232-19601563 | Fetal_Thymus | SE_32371 | chr19:19598258-19599891 | Gastric | SE_32371 | chr19:19599909-19601478 | Gastric | SE_37262 | chr19:19598596-19601447 | HSMMtube | SE_41770 | chr19:19596688-19599943 | LNCaP | SE_41770 | chr19:19599953-19601445 | LNCaP | SE_42846 | chr19:19598281-19601556 | Lung | SE_50636 | chr19:19598249-19601453 | Sigmoid_Colon | SE_53638 | chr19:19595818-19601579 | Spleen | SE_55298 | chr19:19598271-19601370 | Thymus | SE_69075 | chr19:19598313-19601571 | H9 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH19I019484 | chr19 | 19595616 | 19601954 |
|
Enhancer Sequence | TGCTGTGGAA GTGGGATCGT GTCTCAATTT AAGTTTATAA TCCCGGCCTC TCCTCCAGGA 60 AATTCTATGG AAGTTCCTGG CAGGTAACAG AATTTCTGTG CTTGTGAGGT CAGGGCCAGT 120 GCCAGCGGGT CAGGGAGTGG GGGTGGTGCG TGTCAGCGAG CGGGTGAGAC CATTTACGCT 180 GATAACAGCC TGGCCTGCTT CCAGGGATTT TTGTAGGTCA CATAAAATCT CTTGATCACT 240 ACGTTTTACA TTAAGGCTTC TCAAGATGGG CAGGACGGGC TTATGGGATT TGTCCTGAAC 300 TATCACATCA CTTCCAAATA AACTTGGTGC CCGGGACGGC TGCTGTGGAG TGAATGGCAG 360 ACGCTGTCCC TGGGCCACGA TGCCATCCCT CTCAGCATGT TGGGCTAGAT TTCCACTGGT 420 TTTGTTTACT TTAGACAGTT TTTATAATTA AATATTTCCC TGAAATAATG CCTGCAATCA 480 TTTTGAGCCA CATGCTCTTT TTCCTGAATT AAAGATCTCT TTTAGAAAGT ACTGAGACTC 540 TTAAAGCCTC TCTCCTTTAA AAAGTGAGCT TAACAAAGTT TTTCATTTTA GAAACTTAGA 600 GGGGCCAGTG ACCCTGCTGT GTGCGGTGTA TGTAGAGGTG ACTGGAGCCT GTGGTGCAGC 660 AACAGTCCCC TGTGGGCTGG CGCCACACAG GAAGTGCCTG CAGCTCCACA GCCCTGGGGT 720 GAGCCTGGCG CCTCCATTTT CTGACAGTAC CTGAACCTTT ACCTCCCTTC TCAAAATGAA 780 GGCTGCGTGT CACAAACCGG TTGGAACTGG CCGTTGCCAT GGTTTTCACG TTGGAAGGCA 840 CAGTTAAAGG GTCATGTGAC CAAGGAGGGA AATGCCTTTG TCACATGACT TTTTGGTGGC 900 CTGATTAGCA TACAGGAAGT TCACTCCCTG CTGGCTGCTG GGATGCTGAG TGATCATTGA 960 TGGGTGGTGA CATCATCTCT TGGATGAGTT ATTGATTAGT CGCAGGCCAA GATGGGGCCA 1020 GGGAGCGCTG TGGGCAGAGC AGCCCTCTCA GGCAGCTTCA GCTGCTAGGT GGTCTGGACC 1080 CCTCGCCTAC CCTCTTCCTT CAGGCAGGTT TGAATTTTAT TAGACATCTC ACCTCTGGAA 1140 GAAGCACACG CCCTCAATAA GATGATAAGA AGGGTTAAGT CCCTTAGAGC TTGGCTGTCA 1200 TTTCATTTCA GCTCATGCTA GCCCAGGAAT TGTGTCTGTA ACTCTATACA AGATGCTGCC 1260 TTGGCCCCCT GCTCCCCTGT TCACTTTGGA GGCCACCTGG GTGGAGGCCA GCTGCTGCAC 1320 CTCTGTGCTG AAGCCTTGGG ACTGCCTGCC TCTGAGGTGC TCAGTGTGTG TACACGTCCA 1380 GGGAACCTGG AATTAGAGCC CTGAGGTCAC CTTGAAAGTC GATCTTGGGC GGCATGGGGC 1440 CGGCAGCAAG GAGAGACATG CTGGCGGTTT GCTAAGACCT GAGTGAGGTG TCCTGGGTTA 1500 CTTTAGAAAC AAACTACCCG GTTCTGGGCT TCAGAATGTG GGCTGATAAC CCCTTGCCTG 1560 GGGGATTGTA TACTTCGAAA TCGTACCTTT 1590
|