Tag | Content |
---|
EnhancerAtlas ID | HS042-10287 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr12:49594660-49596250 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
CEBPA | MA0102.3 | chr12:49595308-49595319 | TATTATGCAAT | - | 6.02 | LMX1B | MA0703.2 | chr12:49596123-49596134 | TTAATTAAAAT | - | 6.62 |
|
| Number of super-enhancer constituents: 10 | ID | Coordinate | Tissue/cell |
SE_03427 | chr12:49595019-49595876 | Brain_Angular_Gyrus | SE_04162 | chr12:49594617-49596362 | Brain_Anterior_Caudate | SE_05204 | chr12:49593668-49596426 | Brain_Cingulate_Gyrus | SE_06899 | chr12:49593746-49596355 | Brain_Hippocampus_Middle_150 | SE_08188 | chr12:49594603-49597243 | Brain_Inferior_Temporal_Lobe | SE_29656 | chr12:49593963-49596586 | Fetal_Muscle | SE_33510 | chr12:49593654-49597101 | H2171 | SE_37133 | chr12:49594312-49596564 | HSMMtube | SE_55070 | chr12:49594108-49596490 | Stomach_Smooth_Muscle | SE_63429 | chr12:49581126-49628992 | NCI-H69 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| Number: 1 | ID | Chromosome | Start | End |
GH12I049200 | chr12 | 49593848 | 49596754 |
|
Enhancer Sequence | TTTAGAAATC AATTATGCAC AGGCAAAAGA GAACTTAGAA AAAGCTGCCT AGCTTTTTCT 60 TCATCTGCCT AGCCTAAAAG ATCATTTAGC AAACATTTCT CCATTTCCCT GTGGATGTAA 120 ACTTTGATTA TACATGTGTA GAAGAGAAAG GCTTAGAGAA CGCTGTGGGT TTTTTCCTTC 180 ATCTGCTTAT GTGAACAGCA ATCTGTTGTT CTAGTACTGT CTACAGATTA TAAGAGATGT 240 AGAGTTTCAC TCAAGATAGC ATAGCCTGAA ATAAGTCCCT TATATGGCAA GACTATTTAT 300 GGATTTAGTA TATTTTAATA AATAAGCCCA CTATTAATCT TTTTAAAATG ATTTCAGTAT 360 TTTTAGATTT GTAAGAGCGA CTTCACTCTC ACCCCCATGT TACTAAGCAA CGTATTATAC 420 AGTTGCTAGG AGACAGACTA GCAAGGTTGG GGGTATTTCA AATTTCCGTT GTCACCTTGC 480 CTATCACATG ACTATACCCT AGAGAGTTTT ACAGCCTTAG AGAAAAGAGA AAAAAGTTAA 540 TGGCACATAG AAAAGAAGGA AAGAGAGATG AGGTTGAGGA ATAAAGGAAT AGAATAAGGA 600 AAATTGCAAG GTATTTGAGA AGAGTCTGTG AACTTGGCAG GGAAAGGCTA TTATGCAATT 660 TCCTTGAATG AGTCATGGAA AAACCTTAAA TTGCCAGTGC TGTATTTCAT ATTCTGTATG 720 CTTCTACCTT TTCTAAAAAC AAAATAGAGA ATAAGCTTGG AGAAGAAGAT CTTTCAGATA 780 GTTTTTCTGA ATATTTTCAG AAGAGTGGAA ATCAATTATA ACTCTTACAG AAGACAGGTA 840 TTTACAAATG AGTTTTTCAA AGTCACACAT AATTTAAAAT CCCCAAGTCA GATAAACAGC 900 TTATTTCCTT CTATTTCTCC CTCAAAATAG TAAAAAAATG ACAGTACTGA GAGGAAGGTT 960 AGAATACAAG TGTTCTTAGA CAAATTGAGC AGCAAGATGG TCATATAGGC TCTTGGGCAG 1020 TATGTGTTTC TGCACACAAT TTAAAAAATT TAATACAAAG GAGAGAGAGA AGAAGCCTTT 1080 GTACTGTATC TCAAGGACTC TGTATCTGAA ATAAGAAACC AGGCTCCAGG TCTCATTGTG 1140 TGTATGTGAA AAGTTGAGTC TTTGTGTCAT TGTGTCTTCA TGGTATTTAC TGTTGCTAGC 1200 AACCAGGAAG CTCCCTAGTG ATTGTCGCTA GGTCCTCCAT GCCTCTGTCT GCCTGAAACC 1260 TTAGTCAGTG CCAGAAACAC CAGAGATAAA AATCGTTGCA AAAAATCCAG CGCACATCAT 1320 CCCCAGTGGT TTTATAGAAG ACGGTTCATC TTGTGTTCAG TGAAAATCTG TGTAAAATGG 1380 AGGCTTCACA CAGAGCTCAT CCTCAGCTTC TTCTTCATCA ATGCCAATCT TTCCGTGCAG 1440 AGCAGAGTGG ACATTGTGAT GGTTTAATTA AAATAAGATT TATATCCTAG CGTCATCAGC 1500 TTTAACCAAT AAAATAATAA ATAAATAAAT CAGACAGCCG GGCGCGGTGG CTCACGCCTG 1560 TAATCCCAGC ACTTTGGGAG GCTGAGGCAG 1590
|