| Tag | Content |
|---|
EnhancerAtlas ID | HS042-04064 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr1:230239050-230241050 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| IRF1 | MA0050.2 | chr1:230239421-230239442 | AAACAGAAAATGAAAGAACCC | - | 6.65 | | RREB1 | MA0073.1 | chr1:230239920-230239940 | GGTTCTGGGGTGGTGGGGGG | - | 6.25 |
|
| | Number of super-enhancer constituents: 24 | ID | Coordinate | Tissue/cell |
| SE_01245 | chr1:230239641-230243336 | Adrenal_Gland | | SE_01785 | chr1:230239049-230240587 | Aorta | | SE_01785 | chr1:230240637-230243187 | Aorta | | SE_02496 | chr1:230239508-230241945 | Astrocytes | | SE_25348 | chr1:230236453-230250730 | DND41 | | SE_31112 | chr1:230238334-230250198 | Fetal_Thymus | | SE_34791 | chr1:230238329-230243364 | HeLa | | SE_36634 | chr1:230239950-230242005 | HMEC | | SE_37247 | chr1:230239177-230242475 | HSMMtube | | SE_39241 | chr1:230238979-230242188 | IMR90 | | SE_39366 | chr1:230238433-230239296 | Jurkat | | SE_39366 | chr1:230239361-230243263 | Jurkat | | SE_43672 | chr1:230238380-230242897 | MM1S | | SE_45047 | chr1:230239152-230242696 | NHLF | | SE_45719 | chr1:230236856-230242994 | Osteoblasts | | SE_49908 | chr1:230237167-230243238 | RPMI-8402 | | SE_50426 | chr1:230239072-230243127 | Sigmoid_Colon | | SE_51846 | chr1:230239549-230242044 | Skeletal_Muscle_Myoblast | | SE_58501 | chr1:230239434-230311477 | Ly1 | | SE_61418 | chr1:230219055-230306985 | Toledo | | SE_63637 | chr1:230239456-230242241 | HSMM | | SE_65792 | chr1:230239400-230241648 | Pancreatic_islets | | SE_66256 | chr1:230238433-230239296 | Jurkat | | SE_66256 | chr1:230239361-230243263 | Jurkat |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I230101 | chr1 | 230237569 | 230243904 |
|
Enhancer Sequence | TGGTGTTTAC TGTCTTCACC TTAATATACT TTGTATCCAT GAGCAACCTT GCTACAGTCA 60
TGCAAAGATG ATTATTTTTT ATTCAGCAAT AATTAGCCAC AGTGTTGAGC ACCCAGATGC 120
CTTCCTGCAG CAGCCCCCCT TTTCTCCCCA GCCAACATCT GCAACTGTGA ACAGATTTCC 180
ATCTTCAGCC TTGGTGGTTG GAAAGAAATG TAAGTCACCT TTTTTTCTGG TTGGTTCTGG 240
GGCAGATGCC ACCAGGCTGC AGAGGCAGTC TGTGTCTGTG GGGCTCACCA GGGCATGAGT 300
TCTGCTCCCA GGAAAGAGAT TCTTGCAGGA TTTTGTCTGT GGTTCTAAGG AGACAAGTAG 360
GTGGCACACA AAAACAGAAA ATGAAAGAAC CCATCCCTCC AAAACCACAC ACACAAAGCC 420
AAAAGGAAAA AAAAAAAGCA CATAATTATC ATGTAGGCAC TGTTGCAGCT AACCCTGATT 480
TTGGCCTCAA TTCTGAAACA AGTTAGCTGG TTTAGACAAA CCCCTTATTA GGTAATGGAT 540
TGTTATTCAT TCCTCCCCTT CTCCTAGTCA TTTACTCCGT GAGAGCTGCT CCTACCTGAC 600
CTTCCACTGA TTTTGGTAGC AGCATCTCCC AGAGCGACTG TTTCCTTCTT CAGCAGTGTT 660
CCTTACTCAG GGTGTAAGAT CTTAACCCCA CAGAGCCCCG TATCAGGTTT AATTAACTAA 720
TTGATTCAGC TTGTGCTTAC TGAGTGCGAG GCAGTCATGT GCTTCTGTTT GGTAAATGGC 780
TTCATTTTCC CTCTAACTCC TGAGCGTCCT GAAGCTTCTC TTATGGTTCT CTCCAAAGGA 840
GTCAGCAGGC TGGCTCTGCA AGGGTCAGTA GGTTCTGGGG TGGTGGGGGG CCGAGGGAGG 900
CAGGGAGGTT GGCTCTGTCT TTATTTGGCA TAGAGCTCCC CGAACAGGGT CTCTCCTCCT 960
TTCTCCAAAG GTTAATGGAA CCACTATCTT AAAAAGCTGA AATCTTATCT TCTGGGGTAT 1020
TTGGGTAGAG AAGGCTAGGG AATCCCTTTT CCATGGTGGT GCAGTAGGTT CTCAGAACCA 1080
GCTGGTGGGC CTCAAAGAGA GGCGGCTGTA TTTTAGCCTG ATAATCTTGA TTCCTGGTTT 1140
CCTGGCTCTG TAGCATCAGA AATGGGAAGC TTTAAAAGCC GTGCCTTGTT GGATGCACCG 1200
AGTCATAAAA TAAATGTGAT GTGCTGGGTG GGGGAAATGC GGGAGGAGGG AAACAGGTGG 1260
TTGGAGCTGC TTCGTGATGG CCGCCCACCC TGGCTCTCCT TTCTTAATAG GCTTCAGAAA 1320
TCCTGGAATG CGTAATTCAC CAGCTCACAG AGTTCCACCC ATGTCCCCAG TGGCTTCAAA 1380
ATGTAAATGA CATTTGCAGT GCTGGGAGGT AGGAGGGCGA TCCCGTTCCT TCCCTGGATC 1440
TCAGTCGCAG AGGTGCTGGC TCATGTGCCT GAGTGCAGCG GCTGGCCCGT CATTACTGGT 1500
CTTTGCAGGA AGCCACTCTG AAGGCACCTG GGCCCTTGCC AGGCTGAGTC ACAGCTGACT 1560
TAGGGAAATG CCACACAGGA CGCTTGCAGT CCCCCCGTTC TAAGCGTAGG TTTTGCAACT 1620
GCATACTCGG AAAATGAATC AGAGTGGGGG AAAGTGTCAG AGAAACAGCA GAAATGGAAT 1680
GTAGGCAGGA GGGCCACAGT GGCGCTGTGG ATTCAGACCA CACCTTCGGC TCTGTTTGGG 1740
GCCCTTCCTG TAAGGAGCGT ACTGATGCCA GAGGCTGGGG GTGTGGAAGG GAAGCTGCTG 1800
TGCTGTTAGA TCCATTCTGC TATTTAGCCA GCCTTCCTTT TCCCAGCTGG CACAGACAGG 1860
ATGTGTTAGA GAGGTGCTCA GACCTCCTTT CAGAGCAACT GAATCATTCT CCAGGAGGGA 1920
CAGGGAGTCT GAAATGCAAA CAGGTTCCCA GGGTTATTGA AGAGCAGCCA AACTGAACAC 1980
CCACTGCTCT GTGGACTCAA 2000
|
