EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS042-02929

Organism

Homo sapiens

Tissue/cell

Fetal_brain

Coordinate

chr1:164571140-164573070

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nkx2-5(var.2)

MA0503.1

chr1:164571627-164571638

AAGCACTCAAG

6.02

dbSUPER

Number of super-enhancer constituents: 14
ID	Coordinate	Tissue/cell

SE_00464	chr1:164570694-164573368	Adipose_Nuclei
SE_01519	chr1:164571901-164572435	Adrenal_Gland
SE_25876	chr1:164570254-164573154	Duodenum_Smooth_Muscle
SE_27676	chr1:164570259-164573085	Fetal_Intestine
SE_28616	chr1:164570333-164573165	Fetal_Intestine_Large
SE_32913	chr1:164570655-164571404	H1
SE_32913	chr1:164571532-164572864	H1
SE_33860	chr1:164569633-164573012	HCC1954
SE_39285	chr1:164570665-164572853	IMR90
SE_41363	chr1:164570809-164572664	Left_Ventricle
SE_48412	chr1:164570952-164572487	Psoas_Muscle
SE_51565	chr1:164571006-164572929	Skeletal_Muscle
SE_52788	chr1:164570490-164572499	Small_Intestine
SE_54831	chr1:164568973-164572937	Stomach_Smooth_Muscle

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I164599

chr1

164568485

164573019

Enhancer Sequence

AGATCCTGGC TGAGAGCAGA GACCAGCTTC CACTCAGCCA TGCACCCTAG GAGTGGGGAT 60
TCAGCTCTGT GGCTCCAGGA AGGTTAATCT TCAATGTTAA TCCGTTTAGA TAAAGTTGTT 120
AGTTAAAAGG TAATCTGTTT AGCCTCCCTT TCCCCATTCT CCTGCCAGAA AAGAGGGAGT 180
TCAAGTCTTC TTTCCAGGAC TCCTGTGTTT TGGCTGAGAC TGATTCTTCA CTGTGGCCTT 240
GGGAGAAAAG CTGCCTAACC AGTTCTGGGC CCTGGCTAGT TACAACCATG TGTGAGTTGT 300
TTACAGTACG CACAGGTATG GGCTGAAGGG AAACAAAGCT TAAGGGATGA CTAGAAAGGC 360
TTGCTGAAAT TGCTATGGGA GGGCCCCACC CTCCAAGCCA TCTCCCCTCA CACCCCGCTC 420
GGTTTCAGTT TCTGCAGCTT GGTTATGCGA CATTCTCTTA ATCCTTTTTT GAATCTGGTC 480
TCTACTTAAG CACTCAAGAA AACTGCTCCA CAAGGATTGT TTTAGTGGGG TTTTAATTTT 540
TTAAAATGTT CTTGTTTATT TAAATTGCTT GAACAAGGGT TTAGCTGTAT GGGAAGAGTT 600
CCTGCCTTTA GCTATACATG TTTCCACCCA CTTAGACATG CTGCTCACCC ACAGACTCAT 660
ACAGCCTCCA CAGACACAAA GCTTCTGTGT ATCCTACATG TACCTGCACC CCAATTCTGT 720
CAACCTCCCC ACAGCTCTTG ACTGGCTGTT TATCTATTCC ATTCCACTAC CTTCCCACCC 780
CAGCCCTCAA AGTCCCAAAC AGATTGAAAA AAAAAAAAAA AATGGGAGGC AGCAAAATTG 840
CTTACTTGCA CGAAAGGGCT CTTGCCTTTG AGGGGAGCTC TCTAGGCACC TAATTTCTCT 900
TAGATTTCTT TCTGCCCTCA AAGGTACTTG TGGAATGTTT GCCGTTAAAC GGTTGTAAAT 960
TAAGGGCTGA GTGTATGAAG CGTTAATGAA GGCTGCCATT GGAACCAGTC CACGTCCCGT 1020
CCCGGCTGGC AGGTTTGCTG TCCAAGAAGT CTCTTGCTGG AGGCCTGAGT TCCTGAGTGT 1080
CGGGTTTCAG CTCTCCTTTC TTCTTTTTTC GTCTTTTCTT CTGCAGCTAT TTTTTCCCCT 1140
ACCTTCCTTA TAATCCGTCC CTTCCCTTCC TTCTTCCATA CCCACTCCAC CCCTACCCCT 1200
TTGGCTTTTT CTGAAAGTAA CCATGAGGAA CAGAGTCAGA ATGAGGCTAG GGAAGCAGCA 1260
TTTTTTTTTT TCTTTTCCTG TAGAAAGCAG GGCCAAAAGG GTGCATTTTA TTTTTTTCTG 1320
CTTTTCCTTT TATCTCTTTG TGTTTGCTTC ATTTCTTTCT CTTTAAGTCA AGGTTGAAAT 1380
TGATGTTTGC AAAAGACAGG AATTTTGAAT AACTGCCTGA GTTAAACAGA ATATGGAGAA 1440
ACTTTGACTC TGTCCCATGT ATTAAAAATT AAAATTAGGG CAAAATAATG CGGATTTGTC 1500
CTGGAGGACC TGGCCAGATG TAGCTAGAGG ACTTTCACAG TGCTGGTATA ATTATACCTG 1560
GATATGGGAT AATCTTCACT TTAAGCAACT CCATTATGTG AAAATACAGA TCCACAGATA 1620
CATATACAAA TAAACACTTC CAAAAGAAAT CCTTGTATAA TTCAATGTAA TATGTGTTTT 1680
TAAGCTACAA TATGTAAGCC ATCAAAGTAC TGCATTATTT TTAGATAACA GACTTTTCAG 1740
TTTGTTTAAG GTGTGATTAC CTTTACCAAA CATCATTTCT ACTCAAATAG AATGCTTACA 1800
ATAAACTGTA TGGAGGATAC CTACATAAGT CATGTCCTGA GTTTATACTA TTTCCTAGAG 1860
ACATCTCTTT TATACATTTC AAGTTTTAAG TTTAGTCTGA TGTTTTATAC TTTTCAGTTT 1920
AGTACCTGAA 1930