EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS042-01466

Organism

Homo sapiens

Tissue/cell

Fetal_brain

Coordinate

chr1:42342480-42343390

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr1:42342650-42342671	CCTGAGTTTCAGTTTCCTTAC	+	6.27
IRF9	MA0653.1	chr1:42342654-42342669	AGTTTCAGTTTCCTT	-	6.9

dbSUPER

Number of super-enhancer constituents: 6
ID	Coordinate	Tissue/cell

SE_25331	chr1:42325035-42352494	DND41
SE_31241	chr1:42342412-42343256	Fetal_Thymus
SE_39407	chr1:42341350-42343524	Jurkat
SE_44017	chr1:42342111-42343664	MM1S
SE_49913	chr1:42336834-42349775	RPMI-8402
SE_66323	chr1:42341350-42343524	Jurkat

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I041876

chr1

42342241

42343266

Enhancer Sequence

TTCTACAATA TGTTACATCT TGTCTACTTT CTAACTGGGT TTTTTGAGAT GAGTATCATT 60
ACAGAAATTA TCTGCTGTGC AGCCTGGAAA CAGCAAAAGG AAAACTCAGC ACGTTCTACA 120
GACGTGGGTT CAAAGCCCTG CTCTGTCCTC CCTCCAAGCC CTAAACCCCT CCTGAGTTTC 180
AGTTTCCTTA CTGAAGAAGT GGGAAGGCCA TGTGCATTGA GAGGTTACTG TGGTTTTGAG 240
TCCAGTGAAT ACACACACTG CTAAATCCTA AAACTCTTCT TTCTTTTTTG GTTAATAATA 300
TTAAACTCAT CCAGGAGAAT ACCTTAATTT AAGACTCCAG GCAGAATTCT CCTTTCCCCA 360
AGCTCTGCCA ACACCCAAAC CCCTCCCCAG AAGACAGCCT GGTTCACACA ACAGAGGAAC 420
AGACCCCTCA CGACTCTGCA GGGGGAATTC CTTTCTGGGA GAGAACACAT GTCCAATAGG 480
GCCAGTCCCC ACTCAGGCTG CTGCTGTCAC TCAGCCAGAA GGCAGGACAG GCTTTTGAAG 540
CTGTGATATT TCTGAGTTTG GTTTTGGACA AAAACACCAT TCTTCCTCAT AGCCTTTCAC 600
ACCCTGATTC AAGCAATTTT AACTGAATTC TATTTCCCTT CAATAGAAGG CTATTTGAAG 660
ATACAAAAAC CATATTTGTG AATGAATTCT AGGATTGTAT TTGCAGAGTC ACTCCTGTTG 720
GATTTCGTGC TCTATACCAA GTGTATTTCT ACCTCTGGGC CTCAGAACCA TTTCTCACAC 780
CCCCCAACAA TATCTCATGC CCTCATATCC CAAATATGCA ATTACCTATC AGTTGTGAAA 840
GGTAAAAATA AAATTCATAT GGGTTTCATA GGTCAATGGT TCATGTTAAA GGAGACCCAT 900
ATTAAATAAT 910