| Tag | Content |
|---|
EnhancerAtlas ID | HS042-01003 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr1:27753560-27755270 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| EWSR1-FLI1 | MA0149.1 | chr1:27755000-27755018 | CCTTCCTGCCACCCTTCC | - | 7.31 | | RREB1 | MA0073.1 | chr1:27754816-27754836 | GGGGTGGGGGTGTTGGGTAG | - | 6.11 | | ZNF263 | MA0528.1 | chr1:27755032-27755053 | GAAGCAGGTGGAGGGGGAGGG | + | 7.01 | | ZNF263 | MA0528.1 | chr1:27755038-27755059 | GGTGGAGGGGGAGGGAGGAGG | + | 7.58 |
|
| | Number of super-enhancer constituents: 17 | ID | Coordinate | Tissue/cell |
| SE_00672 | chr1:27753245-27758809 | Adipose_Nuclei | | SE_03542 | chr1:27753255-27756169 | Brain_Angular_Gyrus | | SE_04233 | chr1:27753141-27758916 | Brain_Anterior_Caudate | | SE_05445 | chr1:27753110-27759093 | Brain_Cingulate_Gyrus | | SE_06328 | chr1:27752266-27758818 | Brain_Hippocampus_Middle | | SE_08322 | chr1:27752399-27758910 | Brain_Inferior_Temporal_Lobe | | SE_09416 | chr1:27752223-27767860 | CD14 | | SE_11098 | chr1:27752186-27767316 | CD20 | | SE_13960 | chr1:27753196-27762357 | CD34_Primary_RO01536 | | SE_26307 | chr1:27752990-27758914 | Duodenum_Smooth_Muscle | | SE_27105 | chr1:27753545-27756753 | Esophagus | | SE_29771 | chr1:27753175-27758833 | Fetal_Muscle | | SE_37168 | chr1:27752420-27758962 | HSMMtube | | SE_41349 | chr1:27753355-27758691 | Left_Ventricle | | SE_48981 | chr1:27753490-27756705 | Right_Atrium | | SE_55577 | chr1:27754503-27755583 | Thymus | | SE_61796 | chr1:27727767-27766345 | Toledo |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I027425 | chr1 | 27752474 | 27766113 |
|
Enhancer Sequence | GACAATTTCT TATTATTGCC TCTTATTCTT ATTCTTGTTG AGTATCCCCT CAGCAGCTGG 60
TACATAAAAT ATGTTCAACA CAAGTTTATT GGATGAATAA AGGATCAGTT AGCCCCCACA 120
ATGTAAGAAA ATCTTGTTTC CTTGGGCATA AGGTGACTTT GGCCCTCAGA TCAGCTTCCC 180
CAAGATAGGA GTGGTCTGAT CACAAGTGGG AGTGTGAGCA ATGGCATCCA TCAACACCAC 240
CCTGGAAAAA TAGCTGAGAG AGAGCGTAAC TTCAGTAAGT GGAAATAAGA AGCATCATTA 300
GCTAGATGTT CTTTGTCCTA TGAAGAAGGA ACCAGTGTGT GATTGATTGA CTTCCACCCA 360
TTTGGCCTTC TCAGAGAGAG ACAGAGAGAG GCAGAAATTA TGCCTTTAAA AAGCAGTGAG 420
GTCTCTGCAG CCTTGATGTG CTTCCTCGTC AGCTGCACTG CTGTTGTGCT ACTGTCAGTG 480
TTCCTTTGTG TAAGACAGGC ACTGGCAGGG TTTCACTTCT TCATGATGCC CCATCTAGGT 540
TTCTCTAAGC CCTGGATCAA CTGAGATGAT CCCTGAGGTA GGTGAAGGCT TAGGAATCTC 600
AGACTCCATA CATCATCTGG TCATAGAGTT CTGTCTCCTC AGCCTCCTAT TTTAAAGGCT 660
GGGCCTATTG CTATACGGGA GAATGCAGGC TTTCTTGATA TTCCACTGCC TTCACTAAGG 720
GCAGTGATGC GATAGGAGGG GTGACTATCT GAAATAATTC ACACCAAGAT GCCTTTGCTA 780
AGGAAGATCA CTAAAATGGC ATTTTGACGG AGGTTCTTAT GGGAGCTGGA GTGGCACTAG 840
ATAAATGCAG AGCCAATCCA AGCATCTGCC CTTCCCATAT CTCAGCTTCA AGCAAACAAA 900
GTCAACTTGA TTCAGAATGA AATCCAAACC ACATGCATGT ACCCCACCCA AGGCAGTCTC 960
ATTCATTCTT GCCAATTAAA AAAATATATA TAGTTGAGCT GGCTTTCCTT CAGCTCCAAA 1020
ACAGTCTGGG CTAACCCCCA TCTTCCTCCT AAGGAAGAAT GGCTCCAGCT ACTATTTGTG 1080
TCACTGTATG TTCACACAGC TTGCAAAACT CCCAATACCC CAGAGACTGC AGAAGTAATC 1140
TGTACCCTGA ACTTGGACCT GGGGGCTTGC AGCACAATTA AATGTGTACC AGGGTGGACA 1200
AGTCAGTCAG AATCTCTCCG AAGGCATGTT TGCTTTACTC CTCTTTGGGA AGAAAAGGGG 1260
TGGGGGTGTT GGGTAGATAA AAACTATTGG CACATTTGAG GCTTCAACAA AGTCAGGCTA 1320
CATCGAACAG CTCGTGTAAT TACAGGCACA TTCCCCGACC CAAGATACTG CTCTGTGAAC 1380
CTCCCACTTT ACACACACAG AATTCTGCTC TGTCATTCCG TCTGCAGTTT TTGCTGCAGC 1440
CCTTCCTGCC ACCCTTCCCA CAGATTTCTG TTGAAGCAGG TGGAGGGGGA GGGAGGAGGG 1500
AACCTAGAGG GTGGTGGTAG ATAAAGAAGG TTGAAGAGAA GAAGCTACAC CAAAAGGGAG 1560
CCTCTCTTTG GGGAGGAGAG GGAGGATACA TTTTCGCATT ACCTAGGGAA GGCAGATGGG 1620
GGAGAAATAG GAACGCGGGA GGAGAAGGAA ACTAAATAAA GAGCACCAAC GACCCCTGAG 1680
GGCAAAGCAC AGGCTCTCTG AGGCACTCAC 1710
|
