| Tag | Content |
|---|
EnhancerAtlas ID | HS042-00780 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr1:19756040-19757560 |
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| Sox3 | MA0514.1 | chr1:19756464-19756474 | CCTTTGTTTT | + | 6.02 |
|
| | Number of super-enhancer constituents: 29 | ID | Coordinate | Tissue/cell |
| SE_00361 | chr1:19746887-19757387 | Adipose_Nuclei | | SE_01631 | chr1:19755843-19757681 | Aorta | | SE_02919 | chr1:19755911-19756933 | Bladder | | SE_04046 | chr1:19756053-19757455 | Brain_Anterior_Caudate | | SE_05833 | chr1:19750586-19757279 | Brain_Hippocampus_Middle | | SE_09593 | chr1:19755451-19756990 | CD14 | | SE_18410 | chr1:19754667-19757430 | CD4p_CD25-_Il17-_PMAstim_Th | | SE_19269 | chr1:19755104-19757108 | CD4p_CD25-_Il17p_PMAstim_Th17 | | SE_23237 | chr1:19755928-19757811 | Colon_Crypt_1 | | SE_25786 | chr1:19750802-19758037 | Duodenum_Smooth_Muscle | | SE_26537 | chr1:19754835-19758103 | Esophagus | | SE_28668 | chr1:19755603-19757198 | Fetal_Intestine_Large | | SE_29645 | chr1:19755678-19757560 | Fetal_Muscle | | SE_31164 | chr1:19754803-19757992 | Fetal_Thymus | | SE_31447 | chr1:19755938-19757724 | Gastric | | SE_41031 | chr1:19755895-19757535 | Left_Ventricle | | SE_42185 | chr1:19755689-19757735 | Lung | | SE_45110 | chr1:19755943-19756940 | NHLF | | SE_45720 | chr1:19751083-19757454 | Osteoblasts | | SE_46635 | chr1:19755894-19756886 | Ovary | | SE_47234 | chr1:19755677-19758314 | Panc1 | | SE_48688 | chr1:19755923-19757600 | Right_Atrium | | SE_50058 | chr1:19755847-19757828 | Sigmoid_Colon | | SE_51211 | chr1:19755657-19757588 | Skeletal_Muscle | | SE_52345 | chr1:19754876-19757871 | Small_Intestine | | SE_54550 | chr1:19750611-19758089 | Stomach_Smooth_Muscle | | SE_56083 | chr1:19755047-19757873 | u87 | | SE_65446 | chr1:19755872-19757833 | Pancreatic_islets | | SE_67779 | chr1:19755047-19757873 | u87 |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 2 | Chromosome | Start | End |
| chr1 | 19756629 | 19757043 | | chr1 | 19756200 | 19757454 |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I019422 | chr1 | 19749273 | 19757876 |
|
Enhancer Sequence | TACCTCACGG GCCACTGGGA ATGAGGTACC ACGTCTGGGC CATAAGGGCA CCGCCCACAG 60
AGCATCCTCC ATAAAGGGTA GGAACTCTCC CAGAGAGTAA AGCACATGGC TTATCTGCCA 120
GGACTTTTAC ATAACATTTT TTAGGTGCTA GAGGGTCCTT TCTGCCTGGA TTTTTCCCTC 180
ACTTGACACA GGTTTTCCAT TCAGGCTGCC AGGAGTCTCT AGAAAGGTAG GCGGAGTGTT 240
ATGTCAGTTT CCAAGTCATT AAGCACCCAC AAAGGAGGGC AGGCTTGCAC AGCACTCACT 300
CCACACAACC GCCCCTGCCC TGAGTACGAC GGAGCACATG GCTTCCCTAA AGCCACAAGG 360
AGAAGAGAGG CAGGGACAGT GAGAGCTGAA GGAATTCCAC ATGTGTCCAT GGAAGATCAC 420
CTTCCCTTTG TTTTCCTGCA CTCTAGTAAC TCCCTCATGC AGCTTGCTTT CTGAAGCCCT 480
CTGCTCCATT TCCCCAGCCC AGGACAGCAT CAAGAAATAT TTCCACCATC TCATCTATTT 540
GAACCTTCTC CCTATTTACT GGTGCTCCCA ACCCCATCTG AGGCCATCGA AACCAGACAA 600
CTGTGGCAGC ACTAGCAGAG TCCCCAAACT ACCCTGACAC CCTCCCTGGC AAGGAAAATT 660
TCCACGCGCC TCTCCCTGGC ATATTTATTC CAGAGGAAAA CTTAGCAACC TACACACTAC 720
ACACAGGCTC TGTGTCAAAC TCTACAACAG CCATCAGTTG ATCTTTCCCT TACACATCCC 780
TCCAGGAAGT GAAATATCCG AAATGAGTCA TACTCAGGAG TCGGAGCTAT ACTTCCACTG 840
TAGTTTTTTT GGATAACCAA TTCACTGTTT ACACTCCAAA ACCTCTAATT GCTGAACACA 900
GAACAGTTCC TTTGCAGAGA TCAAAGCTTA CCTGGTGAAC CTGGCGAAAT GACAAAAATT 960
CTCCAAAAGG AGTTAGCCAT CCAGAGTGCC AGAGGAGGGT GGCTGTACAA GCACATTTTA 1020
ATTGGCAAAG CAGAGTCGCT GCCCAGCAAG GAAGAGTATG CAGGGGTTTA TTCTGCTGCT 1080
CTTCTATTTC CCCTTTAAGG CATATATCTC TTACCCCTGC ACCCACCAAC TTTAGTCACT 1140
CCTAGCACAC AGCTGGCGGC CGCCCACCCG CACCCGCACC TGCACCCGCA CCTCAGAGAG 1200
CTTGCTGATC CCTGAGCCGT GCACTGAAGC TTCCAAGCAG CTCTACCTAA AGGCAAGCAC 1260
TGCCTGCTTT TTACAACATA TACAATGGGC TAACCTGATG CACAGAAAAA CCCTGGGTCA 1320
CATGACAACC AACAAACTCA TTGCTCAGGA TGGCTCTCCG CCACGTTTCT CAGGCACTGT 1380
GCTTGGCTCT GCTGGCCAAC TGAGTGAGCT GGAGCATTTT CTCTTGGGTG TGCATACCCC 1440
TCCACCTGTC CAACTTTAAA ACACAGAATC AACAGGGATG TTACACTAAA GGGGACCCTA 1500
GAAACCATAT AAACGGTGGA 1520
|
