| Tag | Content |
|---|
EnhancerAtlas ID | HS042-00405 |
Organism | Homo sapiens |
Tissue/cell | Fetal_brain |
Coordinate | chr1:8498570-8499840 |
SNPs | | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
| ELF3 | MA0640.1 | chr1:8498713-8498726 | TTACTTCCGGCTA | - | 6.54 | | Sox6 | MA0515.1 | chr1:8499620-8499630 | CCATTGTTTT | + | 6.02 |
|
| | Number of super-enhancer constituents: 25 | ID | Coordinate | Tissue/cell |
| SE_00045 | chr1:8497982-8499894 | Adipose_Nuclei | | SE_02022 | chr1:8498913-8499948 | Aorta | | SE_03947 | chr1:8498778-8499975 | Brain_Anterior_Caudate | | SE_04978 | chr1:8498182-8500162 | Brain_Cingulate_Gyrus | | SE_07042 | chr1:8498385-8500215 | Brain_Hippocampus_Middle_150 | | SE_07921 | chr1:8498882-8500242 | Brain_Inferior_Temporal_Lobe | | SE_11329 | chr1:8496575-8500743 | CD20 | | SE_25808 | chr1:8497845-8499987 | Duodenum_Smooth_Muscle | | SE_28078 | chr1:8498322-8500011 | Fetal_Intestine | | SE_29095 | chr1:8498172-8499988 | Fetal_Intestine_Large | | SE_29887 | chr1:8497659-8500219 | Fetal_Muscle | | SE_31622 | chr1:8498521-8499967 | Gastric | | SE_40658 | chr1:8498953-8499664 | Left_Ventricle | | SE_41679 | chr1:8499010-8499949 | LNCaP | | SE_42166 | chr1:8498911-8499835 | Lung | | SE_48103 | chr1:8498317-8498850 | Psoas_Muscle | | SE_48103 | chr1:8498931-8499864 | Psoas_Muscle | | SE_48600 | chr1:8498898-8499546 | Right_Atrium | | SE_51176 | chr1:8497978-8500178 | Skeletal_Muscle | | SE_53408 | chr1:8499004-8499850 | Spleen | | SE_54752 | chr1:8497250-8500103 | Stomach_Smooth_Muscle | | SE_58576 | chr1:8455425-8501956 | Ly1 | | SE_60225 | chr1:8480836-8499894 | Ly4 | | SE_60758 | chr1:8454848-8500160 | DHL6 | | SE_62661 | chr1:8450826-8509851 | Tonsil |
|
| | Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | | Number of disease enhancers: 1 | Chromosome | Start | End |
|
| | Number: 1 | ID | Chromosome | Start | End |
| GH01I008437 | chr1 | 8497651 | 8500633 |
|
Enhancer Sequence | GGGTCTCTGG ATTTTTCAGC TAATTTTGAA AAATAGGGAA AAGAGCAATC AGCATTTTGT 60
GCTCACTACA GTAAACCAGG AACACAGGCA TCAGGAGAGC TGGGCTCTGA TTCAAAGGCC 120
TGATTCTAGC AAGGCCTCAC AGTTTACTTC CGGCTAGCCA TGAACACTCT CTGCGCCTGA 180
GGTTTTCGTG GAAAGACAGC ATCACAAGTA CTCAAATGTA GCGTTTAAAA GTACTAACTT 240
TTAAAATGTT GAATGTTCCA GTAAAACAGT TAAAGAAAAA AAAAGGTAAT AATCCAACTA 300
AGTAAAAATA TTAACTTATA CATATCTGGA TAGATGATAA GCTCATTACA GGCCCTAATT 360
TTATTATTTA AAATGTTTAC AACAAAACTC TCTAATTGAT ATTCTCCCTC TCTCTCTCTT 420
TTTGCCTTGA TATGGTTTCT ATAAACTCTT GGTTTAAAAA AGAAAAAAGG TCCATTTCTG 480
AGGCTTGGGT TTACTGTACT TACAGTTCCA CCAGTAAATC GTCTCCCAGT CTGGGCTGGA 540
GAAGCGCTGG CCACGGTTTG ATTGCTCCAG CCCCAGGTTG CCAGGCAACC CACACAAGGG 600
GGAAGTCTGA GAACCGCTGA CAGATAGCCA AGTGGCTGAA ACAACAGACT TCTCTCTGTC 660
AAAAATGTGT TTGAGAGAGC CACTTGCCCA CCTCTGCTCT CTGCTAAACA CTACATGATT 720
GTAAAATCAA AATCAAAAGG CCACTGTAAT AAAAACACAC TTCCTGCTCA ATTACTAATT 780
GTTCTAAAGC TGTGGGGAGG CCCAGATCCT ACAGTGTATG GCAACAGAAA TGCGATACTG 840
TAAATGAGAT AAAGCCAGCA GCATGCAAGA AACCTGATCT AAATGCATCT CCGTAGCTTC 900
AAGTCAGGAG AGCTGGTGTG TGGAGGAATC AACTGCCTAA GAAAACACCA GGAAGAAAAT 960
AATGAATGTC AAGATGTTAA AGAAACAAAC CAATCAATAA CTACGAAGCT AGAGGTCAAG 1020
ACTACTTAGT AATAAAACCA AGAACATTCT CCATTGTTTT GAAACACAAT CTGGAGGCAA 1080
TGAAAGTTTT CTCCCTCAGA TGGAAAGGAG GAGCAAGAAA GGTCAATGAC CCTTGGGAAC 1140
CACACCCCCT GGCGGTTCCA GGTGGATTCC CTGATACTTG ACTGTAAATG GGATTACAGG 1200
AAATAGTAGC ATCCTTAGGA TAATGCAGGA CAATAACAGG TCTGAGAGTC TAATGCAACA 1260
TTTAAAATAC 1270
|
