EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-25622

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr3:52238280-52238700

Target genes

Number: 14
Name	Ensembl ID

ALAS1	ENSG00000023330
TLR9	ENSG00000239732
RP11	ENSG00000173366
TWF2	ENSG00000247596
RP5	ENSG00000243224
PPM1M	ENSG00000164088
WDR82	ENSG00000164091
GLYCTK	ENSG00000242797
DNAH1	ENSG00000114841
BAP1	ENSG00000163930
NISCH	ENSG00000010322
STAB1	ENSG00000010327
C3orf78	ENSG00000168273
NT5DC2	ENSG00000168268

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1

MA0137.3

chr3:52238394-52238405

TTTCTAGGAAA

6.14

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

SE_32043

chr3:52238124-52238640

Gastric

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH03I052204

chr3

52238125

52238640

Enhancer Sequence

TCCCAGCTAC TCAGGAGGCT AAGGTAGGAA GATTGCTTAA GCCCAAGACT TCAAGGTTCA 60
GTGAGCTATG ATCACGCTAT TGCACTCCAG CCTGAATGAC AGACAGAGAC TCAGTTTCTA 120
GGAAAAACAA AAAAATGTAT GGTGAGTTGA GGCTTGAAAG CCATATCCCT TGCTTGCGTG 180
AGCAGGTGCT TTTGGTTGTG GTGACTACAG GTGCTGTTGG TAGCCTGCCT TCTGTCCTTT 240
AATACTTACC GTCTACACAT GGCACTGAGC CAAACACGAC ATACAGTCTT ATTTACTTAC 300
AAGATGAGGA CATCAAATAA CCTGCCCAGG ATCTCCCTCA GTTGCCAAGC TGAGACTTGT 360
TGTATTTCAC CAAAATGCAG CTGTGTTTCA CAACCACCAT TCTGTACTGT CTTTTGTTCA 420