Tag | Content |
---|
EnhancerAtlas ID | HS040-22081 |
Organism | Homo sapiens |
Tissue/cell | Esophagus |
Coordinate | chr20:25027360-25028440 |
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
GATA2 | MA0036.3 | chr20:25027510-25027521 | AGAGATAAGAA | - | 6.32 | Gata1 | MA0035.3 | chr20:25027510-25027521 | AGAGATAAGAA | - | 6.32 |
|
| Number of super-enhancer constituents: 15 | ID | Coordinate | Tissue/cell |
SE_01860 | chr20:25026794-25028563 | Aorta | SE_04126 | chr20:25026832-25027726 | Brain_Anterior_Caudate | SE_05098 | chr20:25026680-25028211 | Brain_Cingulate_Gyrus | SE_05867 | chr20:25009884-25041019 | Brain_Hippocampus_Middle | SE_06947 | chr20:25026871-25031671 | Brain_Hippocampus_Middle_150 | SE_11633 | chr20:25015552-25028126 | CD20 | SE_27084 | chr20:25027352-25029788 | Esophagus | SE_31460 | chr20:25026846-25032962 | Gastric | SE_40636 | chr20:25021770-25040383 | Left_Ventricle | SE_41962 | chr20:25027387-25029716 | LNCaP | SE_42209 | chr20:25026688-25040392 | Lung | SE_48726 | chr20:25026768-25028367 | Right_Atrium | SE_49493 | chr20:25026894-25028436 | Right_Ventricle | SE_51643 | chr20:25022957-25028255 | Skeletal_Muscle | SE_59947 | chr20:25013726-25040720 | Ly4 |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 3 | Chromosome | Start | End |
chr20 | 25027361 | 25027600 | chr20 | 25027645 | 25027767 | chr20 | 25028029 | 25028129 |
|
Enhancer Sequence | AGCTGCAGCA GCTTGGGTCT TCAGAGCCAA GCACACTCCA GTGTGCAGGG GCCACCTGGG 60 GGGCCGCTCA GTTGTCCAGT GGGGCCCGAG GATCCAGGGC AGAAGAATGC TGCTGGCCTA 120 TGGGCCACAC GGCATCTGCA ACCAGGGACT AGAGATAAGA AATGCGTGCT GTATAGGCTG 180 TGAGTCTGGC TGGTGGGGGA GACGGGTCAG CAAAGGAGCC CTGGCCGAGG CTGGTGGAGC 240 TGTGATGGGC CTGAGGGCTC CTGGGGGCCG AGGGGAGGAA CGAGCAGGAC AGGGCCCACT 300 GGGAGCCGCA GCAGATCCAC TAGCATCACT CGTCTGCCTC CAAAAGTCAG CATGAGCACG 360 GTTTTAGCAG GTTTGGTGAA TTTGGTCTGT GATAAAATTG GAGTTCAAGA AACAAACAGG 420 AAACTACAAG TGCCCCTTCG CCCCCAGGTC ACCCGAGTGG CAGGGCAGTG ACCGCTGCTC 480 TCAGGCTGCC CAGTGTGGAC CTGCCTGTCG GAATGCTCCT CCTCCACGTC CCCTCGCTCC 540 TGTGTCCCAG CCACATGCAC CTTCCCTCTA CCTCTGGGAT CCCTGCACCA GGTCTGCCCC 600 TGTCTTCTCA GGGCTGCTCC TCTTGGCCCA CAGGACCTCA GCTGGAATGT TGCCTCCTCC 660 AAGAGGCCTT CCTGACTATT AGCTCACAGT GGCCACCCAG CCACACTCTG CCATGTGCTT 720 GGGGATTGTC TGTTACTGCA ACATACTGCA GCCCATACTG ACACGAAGGC ACCCAGTGAA 780 GACTTGCTAA GTAATTGGAC AAGAAGACCC TGGAGCTGCC CCCAGGAGAG TAATCACGCT 840 CGATGATTGT GTGTGATGGG GACTTAGGAA CTCACAGTTT AGGGGCACAG TGGGCCTGAG 900 GCATCTCTGT AAGGGTAAGG TGAGCTTCAG GCAAACGGGG TTTGCATGGA GAACCAAGGT 960 GCTGCACCAA CACAGCAGCC CCTACAGGAA GCAGCTTGGG GAAGGCCAGT GCAGACCGCC 1020 CAAAGCACAC AGCATCTGAA GCATGCTTGG CACATAGAAT CTGCTTAAGG AATCAGAGAC 1080
|