Tag | Content |
---|
EnhancerAtlas ID | HS040-21727 |
Organism | Homo sapiens |
Tissue/cell | Esophagus |
Coordinate | chr20:351640-354640 |
SNPs | Number: 1 | ID | Chromosome | Position | Genome Version |
|
TF binding sites/motifs | TF | JASPAR ID | Coordinate | Motif Sequence | Strand | -Log10(p-value) |
EWSR1-FLI1 | MA0149.1 | chr20:354010-354028 | GGAAGGAAGGAAGGAAGG | + | 10.83 | EWSR1-FLI1 | MA0149.1 | chr20:352764-352782 | AAAAGGAAGGCAGGAAGG | + | 7.28 | EWSR1-FLI1 | MA0149.1 | chr20:354002-354020 | GAAAAGAGGGAAGGAAGG | + | 7.36 | EWSR1-FLI1 | MA0149.1 | chr20:352788-352806 | GGAAGGAAGGAAGGTCAG | + | 7.43 | EWSR1-FLI1 | MA0149.1 | chr20:352772-352790 | GGCAGGAAGGCAGGCAGG | + | 7.44 | EWSR1-FLI1 | MA0149.1 | chr20:352780-352798 | GGCAGGCAGGAAGGAAGG | + | 7.74 | EWSR1-FLI1 | MA0149.1 | chr20:354006-354024 | AGAGGGAAGGAAGGAAGG | + | 7.85 | EWSR1-FLI1 | MA0149.1 | chr20:354018-354036 | GGAAGGAAGGGAGGGAGG | + | 8.13 | EWSR1-FLI1 | MA0149.1 | chr20:352768-352786 | GGAAGGCAGGAAGGCAGG | + | 8.19 | EWSR1-FLI1 | MA0149.1 | chr20:352776-352794 | GGAAGGCAGGCAGGAAGG | + | 8.42 | EWSR1-FLI1 | MA0149.1 | chr20:352784-352802 | GGCAGGAAGGAAGGAAGG | + | 9.17 | EWSR1-FLI1 | MA0149.1 | chr20:354014-354032 | GGAAGGAAGGAAGGGAGG | + | 9.42 | MEF2C | MA0497.1 | chr20:354268-354283 | GGGATAAAAATAGCA | + | 6.34 | NFE2L1 | MA0089.2 | chr20:351815-351830 | CCTGCTGAGTCACAG | - | 6.03 | NFE2L1 | MA0089.2 | chr20:352804-352819 | AGGTGACTCAGCAAT | + | 6.89 | Nfe2l2 | MA0150.2 | chr20:351817-351832 | TGCTGAGTCACAGTC | - | 6.55 | ZNF263 | MA0528.1 | chr20:354007-354028 | GAGGGAAGGAAGGAAGGAAGG | + | 6.24 | ZNF263 | MA0528.1 | chr20:354011-354032 | GAAGGAAGGAAGGAAGGGAGG | + | 6.76 | ZNF263 | MA0528.1 | chr20:354019-354040 | GAAGGAAGGGAGGGAGGGAAA | + | 6.97 | ZNF263 | MA0528.1 | chr20:354015-354036 | GAAGGAAGGAAGGGAGGGAGG | + | 7.19 |
|
| Number of super-enhancer constituents: 11 | ID | Coordinate | Tissue/cell |
SE_15234 | chr20:349357-357936 | CD4_Memory_Primary_7pool | SE_21243 | chr20:349857-354719 | CD8_Memory_7pool | SE_34190 | chr20:350231-354605 | HCC1954 | SE_35196 | chr20:349088-355405 | HeLa | SE_39865 | chr20:350235-356875 | K562 | SE_56861 | chr20:351592-352091 | VACO_400 | SE_56861 | chr20:352106-353254 | VACO_400 | SE_56861 | chr20:353349-353789 | VACO_400 | SE_57497 | chr20:351576-351999 | VACO_503 | SE_57497 | chr20:352033-353210 | VACO_503 | SE_64879 | chr20:352146-354815 | NHEK |
|
| Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder | Number of disease enhancers: 5 | Chromosome | Start | End |
chr20 | 353974 | 354548 | chr20 | 352488 | 352859 | chr20 | 352123 | 352173 | chr20 | 352269 | 353175 | chr20 | 353462 | 354638 |
|
| Number: 1 | ID | Chromosome | Start | End |
GH20I000368 | chr20 | 349178 | 357150 |
|
Enhancer Sequence | GGCCTGGCTT CAGGACTGGA GCTGCTTTAC CTTAAAGGGC CTGTCGGACC ACATGTACCA 60 TCCCACATCC CAGACCAGCT CTGCACTCAG AGACTGTCCC TCTCTCCCTG CCCTGACTCA 120 GCACCTGCCT GGCCTATCCC CAGTGGTCCT GCCTGACTCT ACCTCCAGCT CCCACCCTGC 180 TGAGTCACAG TCAGGCTGGT CAGGGGGCTG TCCCATGTTC AGTCCAGCCC CTCAGCCTTC 240 CTCGACCTGG GGGGGTATGG GGAGCAGCCC AGAGGGGAGG GGAGCAGGTG CCAAGCTCTT 300 GATTCCTGTG CCTGAGCACT GCCCTGTTGA GACCAGAGAG AGAATCTATG GCTAGGGTAT 360 CTGGGGCTAC AGTTGGGGTT TATCTGGGGC CTGGGGTCAC ACATGATGGA TTAGAGCTAA 420 ATCTATCTCC AGGGTTATAA CTCAATCAGG AGCTAGAATT CAAATTCAGT TTATGGATCA 480 TGTGGGGAAA AAGTGACCAA GACACCGTTC AGTTTGGGAC CTGTGTCGGC GTTAGCTGTG 540 GCTACGGCCC AGGGCTTAGT GATCACAGGT CAGACCATGT TCAAGGTTTC AGGCCAGAGT 600 GCAGTTGAAG TGCAAAGTCA GGCAATAGGG TTCACCCTAG GACCACAGTC AAGGATCTGG 660 GTCAGTTAGT GTCCAGGGCA CTGGCCTTGT CTCCTCTTCT TTGGGAGAGA AGCCAGGTGG 720 ATGAGTTGGA TCTAAATGTC CTGAGGAGCA ACTTCCAGCT CAAGTTCCTT CACCCAGGCG 780 GCCTAAGCCC TCTCAGCACT GGCCCCAAAG CCTTCCTTCA TCCCTCAACT TCCTCCATCA 840 CTCCCTGACA GCCTGGCCTT GCTCAGTGTC CCTCGCAAGG CTGAACAGTC CTCATTCTGG 900 CACCTCAGGG GACAGGGTAG GGGTGGGGAC TATGGGACAG GGCTCAGTGC TGGACCCAGG 960 AGGGCGCCTT GCGCAAGGTT TTCTGATGCA ACTGGCTGAG TGCTTCAGCA TTCCACCCCC 1020 ACCCCCCAAG CTTTTCTCAG AAAGGCAAGG CCTGGGCAGT TATCCAGACT GAACATATAA 1080 TCCCCTTCCT TCTCTGGCCT TTGATGGCTT CAGGACCTGC AGGCAAAAGG AAGGCAGGAA 1140 GGCAGGCAGG AAGGAAGGAA GGTCAGGTGA CTCAGCAATG CGTCCAGCAC TGGGAGCTGG 1200 CAGATCTGGG GCTCCCTCAT CCTCCAGCTG AGAGGCGAGA AAGAGAATCA GGATCCCTGG 1260 AAGTTTGGAG ATCCTAACCC CTTATACATA CAAAGCAGCA ATTATGTGCC TAAGCCCAGG 1320 GAGAGACCTG TAGCTGCCCA AGGTCAGAGG CAAGGTCAGA ACCAGACCAG CTGTCTTCAG 1380 CCCATGGCTA TGATCTAGCT ATTTCCACTA CACAGAAAGA GAGAACCCTT CACCCTTGAG 1440 GAGGACACGG GACTTCCCCA GGAACCTCCC GTCAATCCTG TTGAGGCTCC TGAAATGGTG 1500 GAATGACGTG GACTTTGGAA CCACGCAGAC CTGGGTTTAA ATCCCAGGCC AGGCACGGTG 1560 GCTCATGACT GTAATCCCAA CACTTTGGGA GGCTGAGGCA GGCAGATCAC TTGTGGTCAG 1620 GAGTTTGAGA CCAGCCTGGC CAACATGGTA AAACCCCATC TCTACTAAAA ATACAAAAAC 1680 TAGCCAGGCG TGGTGGCACA CGCCTGTAAT CCCAGCTACT CAGGAGGCAG AAGCGTGAGA 1740 ATCGCTTGAA CCCGGGAGGC GGAGGTTGCA GTGGGCTGAG ATCATGCCAC CGCACTCCTA 1800 GGTGAGAGTG AGACTCCGTC TCAAAAAGCC ACACTGGCTA GCTGTGTAAC GCTGGGCAGG 1860 TTACTTTCAC TCTTTGACAC TGGATTTGCT CACTTGCAAA GTGGGCGTAA ATGCATCCTT 1920 AGCTCACAGG GCTGTGGTGA GGCTGACATG AGGAAGCACT GGAAGGCACA GCTTAGGCTC 1980 CACATGGGCC ACTCTCAGGA AGTGTGTCCC CACCTCCCCC TTTATCCTCA GCTCTCACTG 2040 GGTGTGTTTG CTGGGGAAGG AGGTGCAGCA GCCCTGGGGC CTTGGAAATA ATAATAGCCA 2100 CTCACCCTCC AGTGCTTACC ATGTGCTGGG AACTCTCCTA AGCGTGAACT TAACCTGTAT 2160 TAGCCCATTT AACCCTCCAT TTAATCCAAT AACAGTTCCC AGGCCAGGCA TGGTGGTGCA 2220 TGCCCATAGT CCCAGCTACT CAGGAAGCTG AGGCGGGAGT ATCGCTTGAG CCTGGGAGGT 2280 TGAGGCTACA GTGAGTCATG ATCACCCTAC TGCACTGCAG CCTGGGCAAC AGAGTGAGAT 2340 CTTCTCTCAA AAGAAAAGAA AAGAAAAGAG GGAAGGAAGG AAGGAAGGGA GGGAGGGAAA 2400 TCCCAATGAC AATAAGCAGT TCAATAACCC TACAGGAAAA CACTGTCATC AATCCCACTT 2460 TATAGATAGG GCTGTGGGTC TGAGTAGCTA AGTGACTTTG TCCAAGACAG TGGACAAGAG 2520 ACCACACGGA TTTTGAGCCA GGCCAGCTGG CTCTGAATCC CACTGTCTCC TCCCTCCTTA 2580 AACTAGTGAT GTCACTGCTC TGAGCCCTGG TTTCCTCATC TGTCTCCAGG GATAAAAATA 2640 GCAGCTTCAT GGGGAAGTTT GAGGATGACA CAAGATGACG TAAGGGAGGT CCCCACACAG 2700 GGCTCCACCC ACAGGCATGA GAAGAGCCTT TCTCAGGAAG AATCCCAGGC CGCCCCTGGG 2760 GCAACCGCCG GGCTGGCCTT CCTGCCTCTC CTTAGGCCCA GCCTAGCGTG ATCTGGATGG 2820 TGAGAGATTT CTGCAAAGCC CCCAGGGGCC TCCAGAGAAG GGAGGTGCCC GGTCTCCTAG 2880 ATAAGGGCTC CCAGAGAGGA TCACAGCCCT GGAGTTGCCA TTCTTGAATC ACCCACTGTC 2940 TTCCCCAAGT TGATTGGTCT GAATCCATGT ACTTATTTTT TATATTAGTT CCATAATGTC 3000
|