EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-02500

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr1:156232400-156233180

Target genes

Number: 15
Name	Ensembl ID

UBQLN4	ENSG00000160803
LAMTOR2	ENSG00000116586
RAB25	ENSG00000132698
MEX3A	ENSG00000254726
LMNA	ENSG00000160789
SEMA4A	ENSG00000196189
SLC25A44	ENSG00000160785
RP11	ENSG00000260238
PMF1	ENSG00000160783
BGLAP	ENSG00000242252
PAQR6	ENSG00000160781
SMG5	ENSG00000198952
TMEM79	ENSG00000163472
C1orf85	ENSG00000198715
CCT3	ENSG00000163468

dbSUPER

Number of super-enhancer constituents: 5
ID	Coordinate	Tissue/cell

SE_05526	chr1:156232187-156233903	Brain_Cingulate_Gyrus
SE_06359	chr1:156232039-156233986	Brain_Hippocampus_Middle
SE_07557	chr1:156231966-156233679	Brain_Hippocampus_Middle_150
SE_08694	chr1:156232053-156233399	Brain_Inferior_Temporal_Lobe
SE_27516	chr1:156232199-156233606	Esophagus

GeneHancer

Number: 1
ID	Chromosome	Start	End

GH01I156262

chr1

156232104

156233529

Enhancer Sequence

CCCATGTGCC CATACTGGAA CACCTCTCTA GGGATGTGAC CCAGCATCTC CATCTTTACC 60
ACACCTCCCT CAATGACTAA TGACTGAGTA ACTAACTGTC ATCAGACATA AGCACACACC 120
CAACGGTGCA CCTGGCCCTG ACCCAAACCG TCTCATCTGG GGACTGGGGC GACCCACAGG 180
GAAGAAAGTC TTCCACAGCA GGGCAGGTAT GCCCCTAGAA GAAAACATTG AATAAATGCC 240
TCTGGGAATT AGAAGTTCAA GGCTGACACT CTGAACCTGA GAAGGAAGGG AAAGCTACCA 300
TGGCCCCACC CAGCCTCCAT GGCAGCCGGC TTGACAAGAG CTCGGTCCTG TGTGACTCTC 360
CTTAAGCTGT TCCCCCTGCC TAGTACATCT TCACAACTCT TGTCAGAAGT TCCCATCTCT 420
TCTGTCACTA TCCTCTACTC AATGTTCTCT CCCTTCTCTG GATTCTTTGG TATTTATCAA 480
CTTTGGTCCT TGAACACATA CTTCTACCGG CATTACTCAT AATGGCAGGC ATTATGCCCA 540
GCATTGGGGA TACAAAGCAA AATAAGCAGC TCGCTAATTG TTCCCTGGCC ACAGGCTTTG 600
TGAGGGCCAA GATCATGCCT AATCCTTCCC TGTCAGAGCA TAAGGGCCCA GCACAGATAG 660
GTGATTAATT GCTTGGCAAT AATTCTTGCC TTGGCCATCA GGGGGGATCC TCAGGCCCCA 720
TCCTGGCTCA TCCCCTCCTC CAAGACCCTG GGACCTGACA GGGGCAATGG AGTGGACTGA 780