EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
HS040-02487 
Organism
Homo sapiens 
Tissue/cell
Esophagus 
Coordinate
chr1:156065670-156067700 
TF binding sites/motifs
Number: 12             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
CEBPAMA0102.3chr1:156066188-156066199TGTTGTGCAAT-6.14
CTCFMA0139.1chr1:156066570-156066589GGGCCAGCAGGTGGCGCCA+7.82
NR2C2MA0504.1chr1:156065864-156065879TGACCTCTGACCCAA-6.32
NR2F1MA0017.2chr1:156065860-156065873CTTTTGACCTCTG-6.59
Nr2f6MA0677.1chr1:156065864-156065878TGACCTCTGACCCA-6.37
RFX1MA0509.2chr1:156066986-156067002GGTTTCCATGACAACG-6.89
RFX1MA0509.2chr1:156066986-156067002GGTTTCCATGACAACG+6.91
RFX2MA0600.2chr1:156066986-156067002GGTTTCCATGACAACG-6.76
RFX2MA0600.2chr1:156066986-156067002GGTTTCCATGACAACG+6.88
RFX5MA0510.2chr1:156066986-156067002GGTTTCCATGACAACG-6.22
RFX5MA0510.2chr1:156066986-156067002GGTTTCCATGACAACG+6.3
RxraMA0512.2chr1:156065864-156065878TGACCTCTGACCCA-6.12
Number of super-enhancer constituents: 45             
IDCoordinateTissue/cell
SE_00096chr1:156065452-156068563Adipose_Nuclei
SE_01581chr1:156065560-156068296Aorta
SE_02264chr1:156065996-156067725Astrocytes
SE_04119chr1:156066419-156067747Brain_Anterior_Caudate
SE_05125chr1:156065563-156067404Brain_Cingulate_Gyrus
SE_05929chr1:156065385-156069202Brain_Hippocampus_Middle
SE_08091chr1:156066374-156068302Brain_Inferior_Temporal_Lobe
SE_12411chr1:156066236-156067919CD3
SE_13990chr1:156066343-156067150CD34_Primary_RO01536
SE_14505chr1:156065871-156068273CD4_Memory_Primary_7pool
SE_16807chr1:156065659-156067859CD4_Naive_Primary_8pool
SE_17218chr1:156065550-156068458CD4p_CD225int_CD127p_Tmem
SE_17950chr1:156065300-156069187CD4p_CD25-_CD45ROp_Memory
SE_19616chr1:156065431-156069425CD4p_CD25-_Il17p_PMAstim_Th17
SE_20836chr1:156065575-156067852CD8_Memory_7pool
SE_23093chr1:156065378-156066171Colon_Crypt_1
SE_25840chr1:156065674-156068547Duodenum_Smooth_Muscle
SE_26548chr1:156065336-156068204Esophagus
SE_27785chr1:156066105-156067222Fetal_Intestine
SE_28870chr1:156066270-156067179Fetal_Intestine_Large
SE_29555chr1:156065372-156068015Fetal_Muscle
SE_31480chr1:156066184-156067846Gastric
SE_34290chr1:156065319-156067522HCT-116
SE_34622chr1:156065156-156067691HeLa
SE_35870chr1:156065471-156067456HMEC
SE_36976chr1:156065737-156067519HSMMtube
SE_37998chr1:156065282-156068432HUVEC
SE_40679chr1:156065452-156067998Left_Ventricle
SE_42123chr1:156065499-156068113Lung
SE_44150chr1:156065487-156068218NHDF-Ad
SE_44752chr1:156066014-156067478NHLF
SE_45674chr1:156065383-156068099Osteoblasts
SE_46650chr1:156066459-156067742Ovary
SE_47353chr1:156066082-156067442Panc1
SE_48596chr1:156065694-156067966Right_Atrium
SE_50099chr1:156065286-156067986Sigmoid_Colon
SE_51113chr1:156065341-156068292Skeletal_Muscle
SE_52395chr1:156066354-156068063Small_Intestine
SE_53563chr1:156065686-156068198Spleen
SE_54528chr1:156065632-156069193Stomach_Smooth_Muscle
SE_55941chr1:156065931-156068449u87
SE_63596chr1:156066572-156067180HSMM
SE_64308chr1:156065447-156067140NHEK
SE_65290chr1:156066034-156067742Pancreatic_islets
SE_67798chr1:156065931-156068449u87
Diseases: AD,Huntington,Obesity,Parkinson,Prostate cancer,Schizophrenia and Sleep disorder
Number of disease enhancers: 2             
ChromosomeStartEnd
chr1156065683156067549
chr1156066868156067143
Number: 1             
IDChromosomeStartEnd
GH01I156095chr1156065334156069110
Enhancer Sequence
TGTACATGTC TCTCCCAGGC AGCCTTCACA GACTACTCAG GGGTATGGAT TGGCTCCAGC 60
TCTGACACTC AGACCTGAGC AGAGGCGTGA TCTACTCTGG CCTCCTGTGT TTCTGTGCCC 120
CACCTTCCCA CACTGCCCAG GGCTCCCTGA GAGTGATGCT GAGTCTAGTC TCAGCTTTTA 180
TGTTGCTTTG CTTTTGACCT CTGACCCAAC ACATGCCTCC TTTCCCTCTG AAGTCTTGAT 240
TTTCTCCCTG GCTTTTCTCC ACCTTCTGGG TGTTCCTTTT TGGCCTTCTT TGCCCATCTC 300
TCCTCCTCTG TCTACACAGC CAGGGGCTCC CCCTTCCGTT TCCTCTGCCT GGAACACACT 360
TGCTTCTCCC TTTCTGACTG GCTATTCAAG CAGGATCCTG TAGGTGGGTG GCAGTGCACT 420
GTGTATTACC TGTGAGCCCT ATGCAAATTA CCGCACATCT CTGAACCTGT TTTCCCATCT 480
ATAAAGTGAA GCTAATAGTA GCAATTACCT CATGGGATTG TTGTGCAATT AGTGGGAAGA 540
GGCATGTAAA GTACTGACAT ACTGTCTAGT ACACAGAAAG TGCTTAATAA ATGTTGGTGA 600
TTATTATCCA GGACTCAGCT TAATCATCCC TTCCTCAGGC AGGCCTGCCA CACAACCGCA 660
GACCGGGTTA GGTGCCGGGT TTTCTGCTCC CCAGCGTTTG GAGGCACTCA TCACACATTA 720
ATTACTTTAT CCATGAAGAT GAAAGCTGTC TTTGGCACCC AGATGGTACT GAGTAAATAT 780
CTGTGAATGA ATGAATGATG TGGAATGTCT CCTCTGGAAG GACACAGTCA GGGCCTCCTG 840
CCACTCAGGA CTAGCCTGGA TGCACCCACA GGGAAGGAGA AGGTGGGGCT GGTCTCCGCT 900
GGGCCAGCAG GTGGCGCCAG GGCCTGTCGG TCTCTCCCCT TGGCCACCTC CCTTGCGCTT 960
GCTCATCTCA TGCCCAGGCG CTGAGGGTTC TCAGCTGGGG CAGGAGAGAT GGGGTCCTGA 1020
GGCCTGGGTG AAGTTCCAAG CCCTGGGGCT CGGGGGCAGA CTCTCGCTCA CCCCTCCCAG 1080
AAAGATGTTT TCCTAGGGGA TGTCCAGCCT AACACGGCAG GGAAGGAAGT GGTGGTCACC 1140
TGGGAAAGGG GCCAACCTGA GAGGTTGGGG GTCCTGATGA GGCTGCTATT CTCTTGAGGA 1200
CATGAAATGA GAGGCGGTGA AGTCAGTCAG TGAGTCAAAA GCTGAGATCT AGGAACCAGA 1260
CACAATGTGG GAGAAGCTGC GGTGAAATCA ATCAGTGAGA GAGGAAGGGG AGGCCCGGTT 1320
TCCATGACAA CGGTAGTGTT TGTGGCAAGC TGGGGACTCC TGGGTCCCCA GGGCCCGCAA 1380
GCAGTGATTC ACCACAGGAA AGGGAAGGCT GCAGAGTGAC CTGGTGCTGG GGACCGGATG 1440
CCTTGTGGCT CCTTCTCACT GCTGAGCATG CATTCCCCCA GCCCAGGCCT TGGATCTCTG 1500
CTCTGCCAGC TACTGGCAGG GAAACTGAGG GATGGCAGAA CTGAGCCCCA ATAAGGGGCA 1560
GGCGCTTTGC TCCACGCCGT ACATGCACAT ATCACTTATA TCACTTATTG CTCACAACAG 1620
TCCTATGGAA TTACCGTTAT CCCTGTTTTA TCAAAGAGGA AACTCTCAGC CTGGCCCACG 1680
GTGCCATGGG CAGGACATGA GTGGCAGAGC CAGGATTGGA ACCCAGGCTA GCCTGACTCT 1740
TTACCATGCT TGGGAAGGCC CAGAAAGCAG AAAAGGAAGA GCAGGAGCAT GAGAGTTAGA 1800
GGATGGTTCA GACCCCAGAG GAGATGGACC CCAAGGCCCC TAGCCTCCCT GCCTGCCCTG 1860
CCCTATGCGA GCCCAACACT GATACGGAGG AAAGCTGGCC AACTGCATGG CCTAATGTGG 1920
GCCAGAACCT GGGCAGCCAG CCTACCTCTC ACTCTCCTCC AAGCCCAAGA GAGTAGGCCC 1980
CAGTTCCAGT CCATCCAACT GGATGGTAGC TCCCCCACCG TTTTCTCTCT 2030