EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS040-01707

Organism

Homo sapiens

Tissue/cell

Esophagus

Coordinate

chr1:54836060-54838590

TF binding sites/motifs

Number: 1

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata1

MA0035.3

chr1:54837657-54837668

ACAGATAAGGA

6.14

dbSUPER

Number of super-enhancer constituents: 9
ID	Coordinate	Tissue/cell

SE_04901	chr1:54835827-54837389	Brain_Cingulate_Gyrus
SE_07802	chr1:54836313-54837725	Brain_Inferior_Temporal_Lobe
SE_24449	chr1:54836420-54838982	Colon_Crypt_2
SE_31383	chr1:54835542-54839176	Gastric
SE_41605	chr1:54835339-54836818	LNCaP
SE_41605	chr1:54836881-54839038	LNCaP
SE_50141	chr1:54836364-54839054	Sigmoid_Colon
SE_52383	chr1:54836643-54838577	Small_Intestine
SE_59737	chr1:54819743-54855281	Ly4

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH01I054370	chr1	54836588	54837121
GH01I054371	chr1	54837413	54840674

Enhancer Sequence

TGAAAATAAT TCTGAACCCG GGTTGGCAGA AAAAGAGTTA CCGTGATCAA CTTGCAATGT 60
CTGACACGAG CAAGGGAGGA ATGCCGGAGT ATGTGCCAAG CATTTACCAT CTGTCCTGTG 120
CACCATCACT AGCCTTCAGA TTGGATTTTT ACTCTTTGCT TCATCATATA CTGGACACGT 180
GACTTTAGAA AGTCACTAAA GCCACCTGCG TTTTTATCAA CAAAACGGGG TAATAAGCCT 240
TGTCTGTCAC TGCCCCAGGA CTGCTAGAGG GTGCCAATGA GCTCACATAC AGGAGATTGT 300
TCTACAAAGT GTCCAGTGCA GGGGATTATT ATATGTAAGG GATTACAGTT CTTCTCCACA 360
AGAGTGGCCC TCAGGCACTA CATGTTCCTG AAGAGGCTTC CAAATCAACA AAGAATGAGC 420
ATGCGTGTGG TGGCTGTGAG TGGTGGCAGC CCTCAGCATG GCTCAGCTCA ATTTTAGACT 480
TGGGAACGGT TCCCCCGTCA TACAAGATCA AGGGATCCCA GTGTCTTTGG TGTTCTTCCT 540
GATGTTCTTA GCACTGTGCC GTAAGCACAC ATGGTCCTGA GACCCAAATG CTGTAATACC 600
CCAGGGCTCA GTGATTGAAA AGACAGGGCC AACCCCCTCT CCAGTGGCGG CTGGATGGGA 660
GAGGAGCAAC AAGACTGCTG CCAGAAGACC ACCCAAGGGG GGGTATGCTG AAGGGCCACG 720
AGAAAGGTCT CCAAACACCC CAAAGCTACA GACACTTGTT CCACTGCATT ATTTTCATAG 780
CCATATCAGG TCGCCCTGCA GGCAAACACT ATTCTCAGAT AGGAGCTGCA TGTTCTCACA 840
AGACTAAGTT GCTCAGAGTT AAGATTAGGT TTAGAGCGCA TTAACTCCAG CACCGAGGAA 900
CACTCCATTG TGGACTGAGT AGACACTACC ATGAGCTCAA GCGCCCAAGT GGAAGAAAGC 960
GTGTGTGGAT GCCATGTGTG CATGAACATG TCACACCTTA CATGATGACT TGCTTCAGAA 1020
GGCTGGCTCT GGGGAAGGCT TGGGCGATTT TAAGCCTTGT TTGCCAACAC ATAGGGAGTG 1080
CCTGCTGGGG CCTTCCTCTA CTGTGACACG GGCACAGGAA TGGGAGAGAG ACACACCCAG 1140
TTTGGTGTTT CAGTGTGTCT GCAATGATGG TGCCTCTGGA TGCACTCTCC ACCCCCAAGC 1200
TACCGCCTCT TCTAAAGTGA GGCTAAAATC ACCCATAGGA CTGATGAGAG GACCATCAGT 1260
TAACAATCAT CAATATCGAG AGAGAAGACA CAATAATAAA AATGACAACT GCGTACAGGG 1320
ACTGTGCATG TGCCGGTGCT GCACTGGGCA CCGTGCCCAC GTTTTATCTA ATCCTGCCAA 1380
AGCTGACAGG CTCCTGGCCT CAAAAACGAA GACAGTCGGG CAGGGGTGGG GGAGTGGCTA 1440
CCTTAAGATT AAACACCTTT CTACCCTGCA ACCACCACCT GGTACAGGAA CCGAGGGAAG 1500
GGCCTCCCAC AACATGAGGC ACTCTCTGAG CACATCTCAT ACAGCCAACT CCACCCGAGA 1560
ACCTCATCCT TTCACGGACA TGGGTTATAC TCACTTTACA GATAAGGAAA CTGAGTTGGA 1620
AGGGACTCAC CAACTCTCCC AAACCACTAG TTAATGAGTA TCTCCAACAA CCAGACCTGG 1680
GTTCCTGTCA GGCAAGGCAG GCTAGGCATG TGCCTGGTCT CCCGAGCCTG ACTCTAAAGG 1740
TTTCCAGACT GAGTCCCACA TGCCGTGTAA GCCCTGACAA ATTACTTCCC TTCTCTGTGG 1800
CTCAGTTCTC CAACTGCAAA ATGGGGTAAT ACCTGCCTTG CAGGGTTGGT CTGGAGGATT 1860
AAACTACCTC ATGTTGAAAG CACTGAGAAC AGGGGCTGGC ACAGACTGAG AGCCCAATAA 1920
ATGTCAGGCA CTATCAGTGT TCACTGGCCA TAATCCTCCA AGACAAAGAT CTGCACCTGC 1980
CTGGAATGCC CCTTCCCCTC CACTTTCTTT CTCACTCCTT GAGGCCCAGC AGCAACACCC 2040
CCTCCAGGAA GCCTTCCCAG CCCCTAAAGC AGCCAGCGAC TCCCCTCTCT GGGCTCCCTT 2100
CAAACTCTGC CTGTGTTCCC CATGAGCACT GACCACCACC TACCTTGTCA ATTAGTCTGT 2160
CTGCCGTTCC AGACAACAAT CAACACAATC CTGGCTCAAG TCTGCATCCC CCTAGTGCCA 2220
TACCTGTGGC AGGATCTAGG CTACACTCAA TAAATGGTGA CCACGTGACT GGAAACCCAC 2280
CCACTGCAGG TTTCCGACGC TCTTCCACCC ACAATCCTTT CCTGAGGGCT CAGGAGCATC 2340
AGGCATGGGG CTGAGCACTG CACACCTGTA TTGCTAGTGT ATACCTGTAC CCTGTCCCCT 2400
CTTTTATGAA TGGATAAACT GAGGCCCCAG GGGCCAGGCA ATTAACCCAG GGCCACACAG 2460
CTGGAGAACG GTAGGGCCAG GACAAGGGCA AAGCCTCCCT GACTCCAGCA GACCCTATGC 2520
CTAGTCCTCC 2530